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Manganese in PDB 5i67: Crystal Structure Analysis of Mtb Pepck Mutant C273S

Enzymatic activity of Crystal Structure Analysis of Mtb Pepck Mutant C273S

All present enzymatic activity of Crystal Structure Analysis of Mtb Pepck Mutant C273S:
4.1.1.32;

Protein crystallography data

The structure of Crystal Structure Analysis of Mtb Pepck Mutant C273S, PDB code: 5i67 was solved by J.Dostal, P.Pachl, I.Machova, I.Pichova, J.Snasel, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 43.46 / 2.60
Space group C 2 2 21
Cell size a, b, c (Å), α, β, γ (°) 103.721, 124.598, 121.302, 90.00, 90.00, 90.00
R / Rfree (%) 19.7 / 24.4

Manganese Binding Sites:

The binding sites of Manganese atom in the Crystal Structure Analysis of Mtb Pepck Mutant C273S (pdb code 5i67). This binding sites where shown within 5.0 Angstroms radius around Manganese atom.
In total 2 binding sites of Manganese where determined in the Crystal Structure Analysis of Mtb Pepck Mutant C273S, PDB code: 5i67:
Jump to Manganese binding site number: 1; 2;

Manganese binding site 1 out of 2 in 5i67

Go back to Manganese Binding Sites List in 5i67
Manganese binding site 1 out of 2 in the Crystal Structure Analysis of Mtb Pepck Mutant C273S


Mono view


Stereo pair view

A full contact list of Manganese with other atoms in the Mn binding site number 1 of Crystal Structure Analysis of Mtb Pepck Mutant C273S within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mn705

b:76.1
occ:1.00
O A:HOH835 2.6 51.3 1.0
OD1 A:ASP296 2.9 43.7 1.0
NZ A:LYS229 3.2 44.8 1.0
NE2 A:HIS249 3.3 34.5 1.0
CE1 A:HIS249 3.9 33.5 1.0
CB A:SER271 4.0 41.9 1.0
CG A:ASP296 4.0 39.0 1.0
NZ A:LYS275 4.0 44.8 1.0
CE A:LYS275 4.2 45.4 1.0
OD2 A:ASP296 4.3 39.5 1.0
CE A:LYS229 4.4 43.7 1.0
O A:HOH815 4.4 42.1 1.0
CD2 A:HIS249 4.5 34.4 1.0
O A:HOH832 4.7 33.8 1.0
OG A:SER271 4.8 43.3 1.0
CA A:SER271 4.9 41.0 1.0

Manganese binding site 2 out of 2 in 5i67

Go back to Manganese Binding Sites List in 5i67
Manganese binding site 2 out of 2 in the Crystal Structure Analysis of Mtb Pepck Mutant C273S


Mono view


Stereo pair view

A full contact list of Manganese with other atoms in the Mn binding site number 2 of Crystal Structure Analysis of Mtb Pepck Mutant C273S within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mn706

b:60.2
occ:1.00
O1B A:GDP701 2.1 35.0 1.0
OG1 A:THR276 2.2 43.1 1.0
O A:HOH815 2.2 42.1 1.0
O A:HOH834 2.3 34.6 1.0
O A:HOH821 2.3 36.4 1.0
PB A:GDP701 3.2 36.1 1.0
O2B A:GDP701 3.3 36.2 1.0
CB A:THR276 3.5 42.3 1.0
O1A A:GDP701 4.0 36.4 1.0
O3B A:GDP701 4.1 38.3 1.0
N A:THR276 4.2 39.3 1.0
OD2 A:ASP295 4.3 40.9 1.0
CA A:THR276 4.4 41.0 1.0
O3A A:GDP701 4.4 36.6 1.0
CG2 A:THR276 4.5 40.9 1.0
PA A:GDP701 4.7 37.0 1.0
O A:ASP295 4.8 38.6 1.0
CB A:LYS275 5.0 39.6 1.0

Reference:

J.Dostal, P.Pachl, I.Machova, I.Pichova, J.Snasel. Crystal Structure Analysis of Mtb Pepck Mutant C273S To Be Published.
Page generated: Sun Oct 6 01:27:03 2024

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