Manganese in PDB 5i4k: Metal Abc Transporter From Listeria Monocytogenes with Manganese

The structure of Metal Abc Transporter From Listeria Monocytogenes with Manganese, PDB code: 5i4k was solved by J.Osipiuk, M.Zhou, S.Grimshaw, W.F.Anderson, A.Joachimiak, Center Forstructural Genomics Of Infectious Diseases (Csgid), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	32.40 / 1.79
Space group	P 21 21 21
Cell size a, b, c (Å), α, β, γ (°)	57.906, 62.311, 75.492, 90.00, 90.00, 90.00
R / Rfree (%)	15.5 / 18.9

The structure of Metal Abc Transporter From Listeria Monocytogenes with Manganese also contains other interesting chemical elements:

Chlorine

(Cl)

1 atom

The binding sites of Manganese atom in the Metal Abc Transporter From Listeria Monocytogenes with Manganese (pdb code 5i4k). This binding sites where shown within 5.0 Angstroms radius around Manganese atom.
In total 2 binding sites of Manganese where determined in the Metal Abc Transporter From Listeria Monocytogenes with Manganese, PDB code: 5i4k:
Jump to Manganese binding site number: 1; 2;

Manganese binding site 1 out of 2 in the Metal Abc Transporter From Listeria Monocytogenes with Manganese


Mono view


Stereo pair view

A full contact list of Manganese with other atoms in the Mn binding site number 1 of Metal Abc Transporter From Listeria Monocytogenes with Manganese within 5.0Å range: probe atom residue distance (Å) B Occ A:Mn501 b:16.2 occ:1.00 OD2 A:ASP281 2.1 16.3 1.0 NE2 A:HIS140 2.2 15.5 1.0 OE1 A:GLU206 2.2 15.9 1.0 NE2 A:HIS67 2.2 17.1 1.0 OD1 A:ASP281 2.5 19.0 1.0 OE2 A:GLU206 2.5 16.1 1.0 CG A:ASP281 2.6 17.3 1.0 CD A:GLU206 2.7 15.9 1.0 CE1 A:HIS140 3.1 16.6 1.0 CD2 A:HIS140 3.1 16.3 1.0 CE1 A:HIS67 3.2 17.8 1.0 CD2 A:HIS67 3.2 16.8 1.0 ND2 A:ASN227 3.9 19.0 1.0 CB A:ASP281 4.2 16.3 1.0 CG A:ASN227 4.2 19.1 1.0 CG A:GLU206 4.2 16.0 1.0 O A:HOH639 4.2 20.1 1.0 ND1 A:HIS140 4.2 16.8 1.0 ND1 A:HIS67 4.3 17.2 1.0 CG A:HIS140 4.3 16.2 1.0 O A:HOH652 4.3 19.3 1.0 CG A:HIS67 4.4 17.6 1.0 OD1 A:ASN227 4.6 16.7 1.0 CB A:ALA208 4.7 18.9 1.0 CB A:ASN227 4.7 19.0 1.0 CD1 A:LEU92 4.9 19.6 1.0 CB A:GLU206 5.0 15.6 1.0

Manganese binding site 2 out of 2 in the Metal Abc Transporter From Listeria Monocytogenes with Manganese


Mono view


Stereo pair view

A full contact list of Manganese with other atoms in the Mn binding site number 2 of Metal Abc Transporter From Listeria Monocytogenes with Manganese within 5.0Å range: probe atom residue distance (Å) B Occ A:Mn502 b:25.1 occ:0.60 O A:HOH623 1.9 31.2 1.0 O A:HOH779 2.0 34.7 1.0 O A:HOH724 2.0 37.4 1.0 OD1 A:ASP291 2.2 21.9 1.0 O A:HOH637 2.3 39.0 1.0 OE1 A:GLU295 2.4 37.7 1.0 OE2 A:GLU295 2.7 46.9 1.0 CD A:GLU295 2.9 36.0 1.0 CG A:ASP291 3.2 23.6 1.0 OD2 A:ASP291 3.4 24.3 1.0 O A:GLU288 4.2 21.0 1.0 O A:HOH602 4.3 28.2 1.0 CG A:GLU295 4.4 30.2 1.0 O A:HOH792 4.5 45.4 1.0 CG2 A:THR292 4.5 19.1 1.0 CB A:ASP291 4.6 19.7 1.0 N A:ASP291 4.7 18.3 1.0 CB A:GLU295 5.0 23.8 1.0

J.Osipiuk, M.Zhou, S.Grimshaw, W.F.Anderson, A.Joachimiak, Center For Structural Genomics Of Infectious Diseases(Csgid). Metal Abc Transporter From Listeria Monocytogenes with Manganese To Be Published.