Manganese in PDB 5f3o: Crystal Structure of EHRNASEIII229 From Entamoeba Histolytica Complexed with MN2+

The structure of Crystal Structure of EHRNASEIII229 From Entamoeba Histolytica Complexed with MN2+, PDB code: 5f3o was solved by X.Yu, J.H.Gan, J.B.Ma, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	44.86 / 2.05
Space group	P 21 21 21
Cell size a, b, c (Å), α, β, γ (°)	46.329, 89.729, 100.196, 90.00, 90.00, 90.00
R / Rfree (%)	19.7 / 24

The binding sites of Manganese atom in the Crystal Structure of EHRNASEIII229 From Entamoeba Histolytica Complexed with MN2+ (pdb code 5f3o). This binding sites where shown within 5.0 Angstroms radius around Manganese atom.
In total 2 binding sites of Manganese where determined in the Crystal Structure of EHRNASEIII229 From Entamoeba Histolytica Complexed with MN2+, PDB code: 5f3o:
Jump to Manganese binding site number: 1; 2;

Manganese binding site 1 out of 2 in the Crystal Structure of EHRNASEIII229 From Entamoeba Histolytica Complexed with MN2+


Mono view


Stereo pair view

A full contact list of Manganese with other atoms in the Mn binding site number 1 of Crystal Structure of EHRNASEIII229 From Entamoeba Histolytica Complexed with MN2+ within 5.0Å range: probe atom residue distance (Å) B Occ B:Mn301 b:80.7 occ:1.00 OE2 B:GLU119 2.4 41.8 1.0 OE2 B:GLU51 2.8 51.2 1.0 OD2 B:ASP55 3.0 64.3 1.0 CD B:GLU51 3.0 44.8 1.0 OE1 B:GLU51 3.1 45.4 1.0 OD1 B:ASP116 3.3 46.5 1.0 MN B:MN302 3.3 81.4 1.0 CD B:GLU119 3.5 44.8 1.0 OE1 B:GLU119 4.0 53.3 1.0 CG B:GLU51 4.1 36.3 1.0 CG B:ASP55 4.2 53.5 1.0 CG B:ASP116 4.3 42.8 1.0 CG B:GLU119 4.8 30.2 1.0 CA B:ASP116 4.8 36.8 1.0 CB B:ASP55 4.8 31.0 1.0 NZ B:LYS112 4.8 59.7 1.0 CB B:GLU119 4.9 28.6 1.0 CB B:ASP116 5.0 40.9 1.0

Manganese binding site 2 out of 2 in the Crystal Structure of EHRNASEIII229 From Entamoeba Histolytica Complexed with MN2+


Mono view


Stereo pair view

A full contact list of Manganese with other atoms in the Mn binding site number 2 of Crystal Structure of EHRNASEIII229 From Entamoeba Histolytica Complexed with MN2+ within 5.0Å range: probe atom residue distance (Å) B Occ B:Mn302 b:81.4 occ:1.00 OD2 B:ASP55 2.8 64.3 1.0 OE1 B:GLU51 2.8 45.4 1.0 MN B:MN301 3.3 80.7 1.0 CG B:ASP55 3.5 53.5 1.0 CB B:ASP55 3.6 31.0 1.0 CD B:GLU51 3.9 44.8 1.0 O B:GLU51 4.0 22.0 1.0 NH2 A:ARG85 4.1 31.4 1.0 CA B:PHE52 4.2 22.4 1.0 OE2 B:GLU51 4.5 51.2 1.0 C B:GLU51 4.5 27.2 1.0 N B:PHE52 4.5 23.0 1.0 OD1 B:ASP55 4.6 50.0 1.0 OE2 B:GLU119 4.6 41.8 1.0 O B:PHE52 4.7 22.0 1.0 CG B:GLU51 4.9 36.3 1.0 C B:PHE52 5.0 24.5 1.0

X.Yu, J.H.Gan, J.B.Ma. Structural and Functional Study of A Noncanonical Dicer Protein in Entamoeba Histolytica To Be Published.