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Manganese in PDB 4zs3: Structural Complex of 5-Aminofluorescein Bound to the Fto Protein

Protein crystallography data

The structure of Structural Complex of 5-Aminofluorescein Bound to the Fto Protein, PDB code: 4zs3 was solved by T.Wang, T.Hong, Y.Huang, C.G.Yang, X.Zhou, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 28.91 / 2.45
Space group H 3
Cell size a, b, c (Å), α, β, γ (°) 142.239, 142.239, 83.426, 90.00, 90.00, 120.00
R / Rfree (%) 20.6 / 26.3

Manganese Binding Sites:

The binding sites of Manganese atom in the Structural Complex of 5-Aminofluorescein Bound to the Fto Protein (pdb code 4zs3). This binding sites where shown within 5.0 Angstroms radius around Manganese atom.
In total only one binding site of Manganese was determined in the Structural Complex of 5-Aminofluorescein Bound to the Fto Protein, PDB code: 4zs3:

Manganese binding site 1 out of 1 in 4zs3

Go back to Manganese Binding Sites List in 4zs3
Manganese binding site 1 out of 1 in the Structural Complex of 5-Aminofluorescein Bound to the Fto Protein


Mono view


Stereo pair view

A full contact list of Manganese with other atoms in the Mn binding site number 1 of Structural Complex of 5-Aminofluorescein Bound to the Fto Protein within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mn603

b:94.3
occ:1.00
O5 A:AKG601 2.1 77.5 1.0
C2 A:AKG601 2.3 75.3 1.0
O A:HOH718 2.6 63.7 1.0
C3 A:AKG601 2.7 69.1 1.0
NE2 A:HIS307 2.9 48.6 1.0
OD1 A:ASP233 3.1 55.8 1.0
C4 A:AKG601 3.1 65.2 1.0
NE2 A:HIS231 3.2 47.0 1.0
O1 A:AKG601 3.2 80.2 1.0
C1 A:AKG601 3.2 76.2 1.0
CE1 A:HIS231 3.5 43.6 1.0
CD2 A:HIS307 3.6 44.8 1.0
O A:HOH729 3.9 65.1 1.0
CG A:ASP233 3.9 51.8 1.0
O A:HOH746 3.9 79.5 1.0
CE1 A:HIS307 4.0 51.0 1.0
OD2 A:ASP233 4.0 53.0 1.0
NH2 A:ARG322 4.4 60.8 1.0
O2 A:AKG601 4.4 72.2 1.0
CD2 A:HIS231 4.4 46.6 1.0
C5 A:AKG601 4.6 62.9 1.0
ND1 A:HIS231 4.7 45.3 1.0
CG A:HIS307 4.8 45.0 1.0
ND1 A:HIS307 5.0 46.9 1.0

Reference:

T.Wang, T.Hong, Y.Huang, H.Su, F.Wu, Y.Chen, L.Wei, W.Huang, X.Hua, Y.Xia, J.Xu, J.Gan, B.Yuan, Y.Feng, X.Zhang, C.G.Yang, X.Zhou. Fluorescein Derivatives As Bifunctional Molecules For the Simultaneous Inhibiting and Labeling of Fto Protein J.Am.Chem.Soc. V. 137 13736 2015.
ISSN: ESSN 1520-5126
PubMed: 26457839
DOI: 10.1021/JACS.5B06690
Page generated: Tue Dec 15 04:34:49 2020

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