Manganese in PDB 4udo: Structure of Mn-Bound Periplasmic Metal Binding Protein From Candidatus Liberibacter Asiaticus

The structure of Structure of Mn-Bound Periplasmic Metal Binding Protein From Candidatus Liberibacter Asiaticus, PDB code: 4udo was solved by N.Sharma, P.Selvakumar, P.Kumar, A.K.Sharma, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	47.20 / 2.22
Space group	P 32 2 1
Cell size a, b, c (Å), α, β, γ (°)	94.320, 94.320, 94.330, 90.00, 90.00, 120.00
R / Rfree (%)	16.389 / 19.586

The binding sites of Manganese atom in the Structure of Mn-Bound Periplasmic Metal Binding Protein From Candidatus Liberibacter Asiaticus (pdb code 4udo). This binding sites where shown within 5.0 Angstroms radius around Manganese atom.
In total only one binding site of Manganese was determined in the Structure of Mn-Bound Periplasmic Metal Binding Protein From Candidatus Liberibacter Asiaticus, PDB code: 4udo:

Manganese binding site 1 out of 1 in the Structure of Mn-Bound Periplasmic Metal Binding Protein From Candidatus Liberibacter Asiaticus


Mono view


Stereo pair view

A full contact list of Manganese with other atoms in the Mn binding site number 1 of Structure of Mn-Bound Periplasmic Metal Binding Protein From Candidatus Liberibacter Asiaticus within 5.0Å range: probe atom residue distance (Å) B Occ A:Mn1282 b:18.2 occ:1.00 OD2 A:ASP247 2.2 18.0 1.0 OE2 A:GLU172 2.2 21.3 1.0 OD1 A:ASP247 2.2 15.4 1.0 NE2 A:HIS106 2.2 13.7 1.0 NE2 A:HIS39 2.3 24.0 1.0 OE1 A:GLU172 2.3 20.8 1.0 CG A:ASP247 2.5 16.4 1.0 CD A:GLU172 2.6 19.5 1.0 CD2 A:HIS106 3.2 14.3 1.0 CD2 A:HIS39 3.2 24.0 1.0 CE1 A:HIS39 3.2 26.4 1.0 CE1 A:HIS106 3.2 14.7 1.0 ND2 A:ASN193 4.0 22.9 1.0 CB A:ASP247 4.0 15.3 1.0 CG A:GLU172 4.1 20.1 1.0 ND1 A:HIS39 4.3 26.8 1.0 CG A:HIS39 4.3 28.1 1.0 ND1 A:HIS106 4.3 15.4 1.0 CG A:HIS106 4.3 14.7 1.0 O A:HOH2157 4.3 19.6 1.0 CG A:ASN193 4.6 27.5 1.0 N A:ASN193 4.8 26.1 1.0 O A:HOH2041 4.8 35.1 1.0 CA A:ASP247 4.8 16.0 1.0 CB A:ASN193 4.9 26.3 1.0 CB A:GLU172 5.0 19.6 1.0 CG2 A:VAL246 5.0 19.4 1.0 CG2 A:ILE192 5.0 24.3 1.0

N.Sharma, P.Selvakumar, S.Bhose, D.K.Ghosh, P.Kumar, A.K.Sharma. Crystal Structure of A Periplasmic Solute Binding Protein in Metal-Free, Intermediate and Metal-Bound States From Candidatus Liberibacter Asiaticus. J.Struct.Biol. 2015.
ISSN: ESSN 1095-8657
PubMed: 25641618
DOI: 10.1016/J.JSB.2015.01.012