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Manganese in PDB 4raf: Crystal Structure of PP2CA-D38A

Enzymatic activity of Crystal Structure of PP2CA-D38A

All present enzymatic activity of Crystal Structure of PP2CA-D38A:
3.1.3.16;

Protein crystallography data

The structure of Crystal Structure of PP2CA-D38A, PDB code: 4raf was solved by C.Pan, J.Y.Tang, Y.F.Xu, P.Xiao, H.D.Liu, H.A.Wang, W.B.Wang, F.G.Meng, X.Yu, J.P.Sun, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 37.02 / 2.00
Space group P 31 2 1
Cell size a, b, c (Å), α, β, γ (°) 91.262, 91.262, 105.767, 90.00, 90.00, 120.00
R / Rfree (%) 19.4 / 22.2

Manganese Binding Sites:

The binding sites of Manganese atom in the Crystal Structure of PP2CA-D38A (pdb code 4raf). This binding sites where shown within 5.0 Angstroms radius around Manganese atom.
In total only one binding site of Manganese was determined in the Crystal Structure of PP2CA-D38A, PDB code: 4raf:

Manganese binding site 1 out of 1 in 4raf

Go back to Manganese Binding Sites List in 4raf
Manganese binding site 1 out of 1 in the Crystal Structure of PP2CA-D38A


Mono view


Stereo pair view

A full contact list of Manganese with other atoms in the Mn binding site number 1 of Crystal Structure of PP2CA-D38A within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mn401

b:26.6
occ:1.00
OD1 A:ASP239 2.1 17.4 1.0
OD2 A:ASP282 2.2 25.4 1.0
OD2 A:ASP60 2.2 17.1 1.0
O A:HOH557 2.4 24.3 1.0
O A:HOH534 2.5 28.6 1.0
O A:HOH509 2.6 29.4 1.0
CG A:ASP60 3.1 21.2 1.0
CG A:ASP282 3.1 24.5 1.0
CG A:ASP239 3.1 20.9 1.0
OD1 A:ASP60 3.2 20.5 1.0
OD2 A:ASP239 3.4 23.6 1.0
OD1 A:ASP282 3.5 22.7 1.0
O A:HOH636 3.9 35.2 1.0
N A:GLY240 4.2 15.2 1.0
O A:HOH701 4.2 39.3 1.0
O A:HOH748 4.3 30.0 1.0
O A:HOH506 4.3 16.3 1.0
O A:HOH587 4.3 25.8 1.0
CB A:ASP282 4.4 20.0 1.0
CB A:ASP60 4.5 17.8 1.0
CB A:ASP239 4.5 18.1 1.0
O A:ASN283 4.6 14.1 1.0
SG A:CYS238 4.6 23.0 1.0
N A:ASP239 4.6 12.6 1.0
CB A:CYS238 4.6 14.6 1.0
C A:ASP239 4.8 17.2 1.0
O A:HOH524 4.8 23.8 1.0
CA A:ASP239 4.8 13.6 1.0
CA A:GLY240 4.8 16.6 1.0

Reference:

C.Pan, J.Y.Tang, Y.F.Xu, P.Xiao, H.D.Liu, H.A.Wang, W.B.Wang, F.G.Meng, X.Yu, J.P.Sun. The Catalytic Role of the M2 Metal Ion in PP2C Alpha Sci Rep V. 5 8560 2015.
ISSN: ESSN 2045-2322
PubMed: 25708299
DOI: 10.1038/SREP08560
Page generated: Sat Oct 5 21:08:23 2024

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