Manganese in PDB 4phr: Domain of Unknown Function 1792 (DUF1792) with Manganese

The structure of Domain of Unknown Function 1792 (DUF1792) with Manganese, PDB code: 4phr was solved by H.Zhang, H.Wu, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	37.64 / 1.34
Space group	C 1 2 1
Cell size a, b, c (Å), α, β, γ (°)	71.474, 45.409, 78.782, 90.00, 109.74, 90.00
R / Rfree (%)	14.7 / 18.8

The binding sites of Manganese atom in the Domain of Unknown Function 1792 (DUF1792) with Manganese (pdb code 4phr). This binding sites where shown within 5.0 Angstroms radius around Manganese atom.
In total only one binding site of Manganese was determined in the Domain of Unknown Function 1792 (DUF1792) with Manganese, PDB code: 4phr:

Manganese binding site 1 out of 1 in the Domain of Unknown Function 1792 (DUF1792) with Manganese


Mono view


Stereo pair view

A full contact list of Manganese with other atoms in the Mn binding site number 1 of Domain of Unknown Function 1792 (DUF1792) with Manganese within 5.0Å range: probe atom residue distance (Å) B Occ A:Mn302 b:14.2 occ:1.00 O A:HOH617 2.2 17.7 1.0 O A:HOH543 2.2 15.8 1.0 OXT A:ACT303 2.2 19.2 1.0 O A:HOH540 2.2 14.5 1.0 O1B A:UDP301 2.2 11.6 1.0 O A:HOH546 2.2 20.2 1.0 C A:ACT303 3.3 28.6 1.0 PB A:UDP301 3.4 8.7 1.0 O3B A:UDP301 3.7 10.5 1.0 NH1 A:ARG116 3.8 17.0 1.0 CH3 A:ACT303 3.8 25.2 1.0 ND1 A:HIS223 4.0 10.2 1.0 O A:HOH544 4.0 16.5 1.0 OE2 A:GLU248 4.1 32.5 1.0 O A:HOH627 4.1 33.7 1.0 O3A A:UDP301 4.2 9.4 1.0 OD2 A:ASP31 4.2 16.2 1.0 O1A A:UDP301 4.3 12.2 1.0 O A:ACT303 4.3 36.0 1.0 CE1 A:HIS223 4.4 10.5 1.0 O2B A:UDP301 4.6 10.3 1.0 O A:HOH640 4.8 33.0 1.0 OXT A:ACT304 4.9 46.4 1.0 PA A:UDP301 4.9 8.8 1.0

H.Zhang, F.Zhu, T.Yang, L.Ding, M.Zhou, J.Li, S.M.Haslam, A.Dell, H.Erlandsen, H.Wu. The Highly Conserved Domain of Unknown Function 1792 Has A Distinct Glycosyltransferase Fold. Nat Commun V. 5 4339 2014.
ISSN: ESSN 2041-1723
PubMed: 25023666
DOI: 10.1038/NCOMMS5339