Manganese in PDB 4p9y: Structure of Cona/RH4MAN

The structure of Structure of Cona/RH4MAN, PDB code: 4p9y was solved by F.Sakai, M.S.Weiss, G.Chen, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	30.00 / 1.89
Space group	P 21 21 2
Cell size a, b, c (Å), α, β, γ (°)	61.600, 116.110, 58.690, 90.00, 90.00, 90.00
R / Rfree (%)	20.1 / 25.8

The structure of Structure of Cona/RH4MAN also contains other interesting chemical elements:

Calcium

(Ca)

2 atoms

The binding sites of Manganese atom in the Structure of Cona/RH4MAN (pdb code 4p9y). This binding sites where shown within 5.0 Angstroms radius around Manganese atom.
In total 2 binding sites of Manganese where determined in the Structure of Cona/RH4MAN, PDB code: 4p9y:
Jump to Manganese binding site number: 1; 2;

Manganese binding site 1 out of 2 in the Structure of Cona/RH4MAN


Mono view


Stereo pair view

A full contact list of Manganese with other atoms in the Mn binding site number 1 of Structure of Cona/RH4MAN within 5.0Å range: probe atom residue distance (Å) B Occ A:Mn302 b:26.4 occ:1.00 O A:HOH422 2.2 23.4 1.0 OD2 A:ASP10 2.2 20.3 1.0 OD1 A:ASP19 2.2 24.1 1.0 NE2 A:HIS24 2.2 25.4 1.0 OE2 A:GLU8 2.3 21.4 1.0 O A:HOH423 2.4 25.5 1.0 CG A:ASP19 3.2 25.7 1.0 CD2 A:HIS24 3.2 25.3 1.0 CG A:ASP10 3.2 19.8 1.0 CD A:GLU8 3.2 21.0 1.0 CE1 A:HIS24 3.2 25.9 1.0 OE1 A:GLU8 3.5 19.6 1.0 CB A:ASP10 3.6 20.1 1.0 OD2 A:ASP19 3.6 25.9 1.0 O A:HOH424 4.0 21.5 1.0 OG A:SER34 4.2 22.5 1.0 O A:HOH439 4.2 27.9 1.0 CA A:CA303 4.2 22.8 1.0 OD1 A:ASP10 4.3 19.8 1.0 CB A:ASP19 4.3 28.2 1.0 CG A:HIS24 4.3 25.2 1.0 ND1 A:HIS24 4.4 25.2 1.0 CG A:GLU8 4.6 20.8 1.0 CA A:ASP19 4.6 29.6 1.0 O A:VAL32 4.7 24.6 1.0

Manganese binding site 2 out of 2 in the Structure of Cona/RH4MAN


Mono view


Stereo pair view

A full contact list of Manganese with other atoms in the Mn binding site number 2 of Structure of Cona/RH4MAN within 5.0Å range: probe atom residue distance (Å) B Occ B:Mn302 b:33.5 occ:1.00 OD2 B:ASP10 2.2 29.6 1.0 O B:HOH410 2.2 29.7 1.0 OE2 B:GLU8 2.2 31.7 1.0 O B:HOH409 2.2 36.8 1.0 NE2 B:HIS24 2.3 31.0 1.0 OD1 B:ASP19 2.3 38.5 1.0 CG B:ASP19 3.2 39.0 1.0 CE1 B:HIS24 3.2 32.2 1.0 CD B:GLU8 3.2 31.5 1.0 CG B:ASP10 3.2 28.7 1.0 CD2 B:HIS24 3.3 32.6 1.0 OE1 B:GLU8 3.5 30.3 1.0 OD2 B:ASP19 3.5 37.8 1.0 CB B:ASP10 3.6 29.7 1.0 O B:HOH411 4.1 29.6 1.0 OG B:SER34 4.2 26.4 1.0 CA B:CA303 4.2 35.5 1.0 OD1 B:ASP10 4.3 27.4 1.0 ND1 B:HIS24 4.3 33.4 1.0 CB B:ASP19 4.4 39.4 1.0 CG B:HIS24 4.4 33.0 1.0 CG B:GLU8 4.6 29.3 1.0 O B:VAL32 4.7 32.6 1.0 CA B:ASP19 4.7 40.2 1.0

F.Sakai, M.S.Weiss, G.Chen. Structure of Cona/RH4MAN To Be Published.