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Manganese in PDB 4hig: Ultrahigh-Resolution Crystal Structure of Z-Dna in Complex with MN2+ Ion.

Protein crystallography data

The structure of Ultrahigh-Resolution Crystal Structure of Z-Dna in Complex with MN2+ Ion., PDB code: 4hig was solved by P.Drozdzal, M.Gilski, R.Kierzek, L.Lomozik, M.Jaskolski, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 25.57 / 0.75
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 17.732, 31.436, 43.935, 90.00, 90.00, 90.00
R / Rfree (%) 7.1 / 8.1

Manganese Binding Sites:

The binding sites of Manganese atom in the Ultrahigh-Resolution Crystal Structure of Z-Dna in Complex with MN2+ Ion. (pdb code 4hig). This binding sites where shown within 5.0 Angstroms radius around Manganese atom.
In total only one binding site of Manganese was determined in the Ultrahigh-Resolution Crystal Structure of Z-Dna in Complex with MN2+ Ion., PDB code: 4hig:

Manganese binding site 1 out of 1 in 4hig

Go back to Manganese Binding Sites List in 4hig
Manganese binding site 1 out of 1 in the Ultrahigh-Resolution Crystal Structure of Z-Dna in Complex with MN2+ Ion.


Mono view


Stereo pair view

A full contact list of Manganese with other atoms in the Mn binding site number 1 of Ultrahigh-Resolution Crystal Structure of Z-Dna in Complex with MN2+ Ion. within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mn102

b:1.9
occ:1.00
O A:HOH250 1.9 7.0 0.2
O A:HOH203 2.1 1.8 0.5
O A:HOH252 2.1 3.2 0.9
O A:HOH251 2.2 4.3 1.0
O A:HOH216 2.2 2.7 0.8
O A:HOH250 2.2 2.3 0.8
O A:HOH216 2.3 5.5 0.2
N7 A:DG6 2.3 1.6 1.0
O A:HOH203 2.3 6.0 0.5
C8 A:DG6 3.2 1.8 1.0
C5 A:DG6 3.3 1.4 1.0
O6 A:DG6 3.6 2.7 1.0
C6 A:DG6 3.9 1.6 1.0
OP1 A:DC5 4.2 2.9 1.0
O B:HOH110 4.3 2.7 0.8
N9 A:DG6 4.4 1.5 1.0
C4 A:DG6 4.5 1.3 1.0

Reference:

P.Drozdzal, M.Gilski, R.Kierzek, L.Lomozik, M.Jaskolski. Ultrahigh-Resolution Crystal Structures of Z-Dna in Complex with Mn(2+) and Zn(2+) Ions. Acta Crystallogr.,Sect.D V. 69 1180 2013.
ISSN: ISSN 0907-4449
PubMed: 23695262
DOI: 10.1107/S0907444913007798
Page generated: Sat Oct 5 19:41:31 2024

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