Manganese in PDB 4fix: Crystal Structure of GLFT2

The structure of Crystal Structure of GLFT2, PDB code: 4fix was solved by R.W.Wheatley, R.B.Zheng, T.L.Lowary, K.K.S.Ng, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	40.00 / 2.45
Space group	P 4 21 2
Cell size a, b, c (Å), α, β, γ (°)	150.791, 150.791, 148.016, 90.00, 90.00, 90.00
R / Rfree (%)	18.5 / 22.2

The binding sites of Manganese atom in the Crystal Structure of GLFT2 (pdb code 4fix). This binding sites where shown within 5.0 Angstroms radius around Manganese atom.
In total 2 binding sites of Manganese where determined in the Crystal Structure of GLFT2, PDB code: 4fix:
Jump to Manganese binding site number: 1; 2;

Manganese binding site 1 out of 2 in the Crystal Structure of GLFT2


Mono view


Stereo pair view

A full contact list of Manganese with other atoms in the Mn binding site number 1 of Crystal Structure of GLFT2 within 5.0Å range: probe atom residue distance (Å) B Occ A:Mn704 b:73.9 occ:1.00 OD2 A:ASP256 2.0 53.8 1.0 OD1 A:ASP258 2.2 65.8 1.0 NE2 A:HIS396 2.4 62.5 1.0 CG A:ASP256 2.9 53.5 1.0 CG A:ASP258 2.9 65.2 1.0 OD2 A:ASP258 2.9 70.2 1.0 CE1 A:HIS396 3.1 60.1 1.0 OD1 A:ASP256 3.3 60.6 1.0 CD2 A:HIS396 3.5 56.5 1.0 CB A:ASP256 4.2 51.8 1.0 OD1 A:ASP257 4.3 49.7 1.0 ND1 A:HIS396 4.3 61.5 1.0 CB A:ASP258 4.4 58.6 1.0 CG A:HIS396 4.5 53.6 1.0 N A:ASP258 4.7 55.3 1.0

Manganese binding site 2 out of 2 in the Crystal Structure of GLFT2


Mono view


Stereo pair view

A full contact list of Manganese with other atoms in the Mn binding site number 2 of Crystal Structure of GLFT2 within 5.0Å range: probe atom residue distance (Å) B Occ B:Mn703 b:72.5 occ:1.00 OD2 B:ASP256 2.2 60.0 1.0 OD1 B:ASP258 2.3 67.8 1.0 NE2 B:HIS396 2.4 62.7 1.0 OD2 B:ASP258 2.7 75.2 1.0 CG B:ASP258 2.9 70.7 1.0 CG B:ASP256 3.0 58.1 1.0 CE1 B:HIS396 3.1 60.1 1.0 OD1 B:ASP256 3.3 65.2 1.0 CD2 B:HIS396 3.6 56.9 1.0 NH1 B:ARG171 4.1 79.9 1.0 ND1 B:HIS396 4.3 61.8 1.0 CB B:ASP256 4.3 56.1 1.0 CB B:ASP258 4.4 64.8 1.0 CG B:HIS396 4.6 56.9 1.0 OD1 B:ASP257 4.6 58.2 1.0 NH2 B:ARG171 4.6 81.4 1.0 CZ B:ARG171 4.8 80.1 1.0 N B:ASP258 4.9 60.2 1.0

R.W.Wheatley, R.B.Zheng, M.R.Richards, T.L.Lowary, K.K.Ng. Tetrameric Structure of the GLFT2 Galactofuranosyltransferase Reveals A Scaffold For the Assembly of Mycobacterial Arabinogalactan. J.Biol.Chem. V. 287 28132 2012.
ISSN: ISSN 0021-9258
PubMed: 22707726
DOI: 10.1074/JBC.M112.347484