Manganese in PDB 4c22: L-Fucose Isomerase in Complex with Fuculose

All present enzymatic activity of L-Fucose Isomerase in Complex with Fuculose:
5.3.1.25;

The structure of L-Fucose Isomerase in Complex with Fuculose, PDB code: 4c22 was solved by M.A.Higgins, M.D.L.Suits, C.Marsters, A.B.Boraston, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	49.26 / 2.70
Space group	H 3 2
Cell size a, b, c (Å), α, β, γ (°)	151.450, 151.450, 406.400, 90.00, 90.00, 120.00
R / Rfree (%)	14.403 / 19.836

The binding sites of Manganese atom in the L-Fucose Isomerase in Complex with Fuculose (pdb code 4c22). This binding sites where shown within 5.0 Angstroms radius around Manganese atom.
In total 2 binding sites of Manganese where determined in the L-Fucose Isomerase in Complex with Fuculose, PDB code: 4c22:
Jump to Manganese binding site number: 1; 2;

Manganese binding site 1 out of 2 in the L-Fucose Isomerase in Complex with Fuculose


Mono view


Stereo pair view

A full contact list of Manganese with other atoms in the Mn binding site number 1 of L-Fucose Isomerase in Complex with Fuculose within 5.0Å range: probe atom residue distance (Å) B Occ A:Mn601 b:66.7 occ:1.00 O A:HOH2139 2.1 36.1 1.0 O1 A:CVU1589 2.1 46.1 1.0 NE2 A:HIS525 2.3 38.7 1.0 OD2 A:ASP359 2.4 52.5 1.0 C1 A:CVU1589 2.6 54.8 1.0 OD1 A:ASP359 2.8 55.2 1.0 CG A:ASP359 2.9 45.9 1.0 O2 A:CVU1589 2.9 64.0 1.0 OE1 A:GLU335 2.9 47.5 1.0 CE1 A:HIS525 3.1 38.9 1.0 C2 A:CVU1589 3.1 59.7 1.0 CD2 A:HIS525 3.4 37.4 1.0 OE2 A:GLU335 3.5 52.2 1.0 CD A:GLU335 3.6 47.0 1.0 ND2 A:ASN524 3.9 39.0 1.0 CB A:ASP359 4.3 40.6 1.0 ND1 A:HIS525 4.3 37.2 1.0 OD1 A:ASN390 4.4 30.4 1.0 CG A:HIS525 4.5 36.6 1.0 OG A:SER391 4.5 50.5 1.0 CB A:SER391 4.5 40.8 1.0 C3 A:CVU1589 4.6 61.1 1.0 CE1 A:PHE357 4.9 29.0 1.0 N A:SER391 5.0 36.3 1.0

Manganese binding site 2 out of 2 in the L-Fucose Isomerase in Complex with Fuculose


Mono view


Stereo pair view

A full contact list of Manganese with other atoms in the Mn binding site number 2 of L-Fucose Isomerase in Complex with Fuculose within 5.0Å range: probe atom residue distance (Å) B Occ B:Mn601 b:54.8 occ:1.00 OD1 B:ASP359 2.1 49.8 1.0 O B:HOH2137 2.2 48.1 1.0 O1 B:CVU1589 2.3 51.5 1.0 O2 B:CVU1589 2.3 55.7 1.0 NE2 B:HIS525 2.4 29.9 1.0 C1 B:CVU1589 2.9 56.3 1.0 CG B:ASP359 2.9 51.0 1.0 C2 B:CVU1589 2.9 58.8 1.0 OE1 B:GLU335 2.9 41.0 1.0 OD2 B:ASP359 3.0 60.5 1.0 CD2 B:HIS525 3.3 29.8 1.0 OE2 B:GLU335 3.4 40.1 1.0 CE1 B:HIS525 3.4 29.7 1.0 CD B:GLU335 3.5 39.5 1.0 ND2 B:ASN524 3.8 34.9 1.0 OD1 B:ASN390 4.0 34.7 1.0 OG B:SER391 4.0 43.4 1.0 CB B:SER391 4.3 37.4 1.0 CB B:ASP359 4.3 43.3 1.0 C3 B:CVU1589 4.4 62.3 1.0 CG B:HIS525 4.5 30.1 1.0 ND1 B:HIS525 4.5 31.3 1.0 N B:SER391 4.7 35.3 1.0 CE1 B:PHE357 4.8 26.7 1.0 O3 B:CVU1589 4.8 72.5 1.0 CA B:ASP359 4.8 35.8 1.0 O4 B:CVU1589 4.9 51.3 1.0 CG B:GLU335 5.0 36.5 1.0

M.A.Higgins, M.D.Suits, C.Marsters, A.B.Boraston. Structural and Functional Analysis of Fucose-Processing Enzymes From Streptococcus Pneumoniae. J.Mol.Biol. V. 426 1469 2014.
ISSN: ISSN 0022-2836
PubMed: 24333485
DOI: 10.1016/J.JMB.2013.12.006