Atomistry » Manganese » PDB 4b5i-4dec » 4bem
Atomistry »
  Manganese »
    PDB 4b5i-4dec »
      4bem »

Manganese in PDB 4bem: Crystal Structure of the F-Type Atp Synthase C-Ring From Acetobacterium Woodii.

Protein crystallography data

The structure of Crystal Structure of the F-Type Atp Synthase C-Ring From Acetobacterium Woodii., PDB code: 4bem was solved by D.Matthies, T.Meier, O.Yildiz, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 47.200 / 2.10
Space group P 43 21 2
Cell size a, b, c (Å), α, β, γ (°) 121.170, 121.170, 150.570, 90.00, 90.00, 90.00
R / Rfree (%) 18.18 / 21.98

Other elements in 4bem:

The structure of Crystal Structure of the F-Type Atp Synthase C-Ring From Acetobacterium Woodii. also contains other interesting chemical elements:

Sodium (Na) 10 atoms

Manganese Binding Sites:

The binding sites of Manganese atom in the Crystal Structure of the F-Type Atp Synthase C-Ring From Acetobacterium Woodii. (pdb code 4bem). This binding sites where shown within 5.0 Angstroms radius around Manganese atom.
In total only one binding site of Manganese was determined in the Crystal Structure of the F-Type Atp Synthase C-Ring From Acetobacterium Woodii., PDB code: 4bem:

Manganese binding site 1 out of 1 in 4bem

Go back to Manganese Binding Sites List in 4bem
Manganese binding site 1 out of 1 in the Crystal Structure of the F-Type Atp Synthase C-Ring From Acetobacterium Woodii.


Mono view


Stereo pair view

A full contact list of Manganese with other atoms in the Mn binding site number 1 of Crystal Structure of the F-Type Atp Synthase C-Ring From Acetobacterium Woodii. within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Mn1083

b:0.6
occ:1.00
OE1 C:GLU2 2.0 0.3 1.0
O C:HOH2001 2.1 0.2 1.0
O1 D:FME1 2.3 0.3 1.0
CD C:GLU2 2.9 0.3 1.0
CN D:FME1 3.2 0.9 1.0
OE2 C:GLU2 3.2 0.6 1.0
N D:FME1 4.2 0.9 1.0
N C:GLY3 4.2 87.2 1.0
CG C:GLU2 4.3 0.5 1.0
CA C:GLU2 4.7 94.3 1.0
OE2 D:GLU2 4.7 0.9 1.0
CB C:GLU2 4.7 0.9 1.0
CA D:FME1 4.8 96.8 1.0

Reference:

D.Matthies, W.Zhou, A.L.Klyszejko, C.Anselmi, O.Yildiz, K.Brandt, V.Muller, J.D.Faraldo-Gomez, T.Meier. High-Resolution Structure and Mechanism of An F/V-Hybrid Rotor Ring in A Na+-Coupled Atp Synthase Nat.Commun. 2014.
ISSN: ESSN 2041-1723
DOI: 10.1038/NCOMMS6286
Page generated: Tue Dec 15 04:18:27 2020

Last articles

Zn in 7VD8
Zn in 7V1R
Zn in 7V1Q
Zn in 7VPF
Zn in 7T85
Zn in 7T5F
Zn in 7NF9
Zn in 7M4M
Zn in 7M4O
Zn in 7M4N
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy