Atomistry » Manganese » PDB 3x30-4b5h » 3x30
Atomistry »
  Manganese »
    PDB 3x30-4b5h »
      3x30 »

Manganese in PDB 3x30: Crystal Structure of Metallo-Beta-Lactamase From Thermotoga Maritima

Protein crystallography data

The structure of Crystal Structure of Metallo-Beta-Lactamase From Thermotoga Maritima, PDB code: 3x30 was solved by H.J.Choi, H.J.Kim, A.Matsuura, B.Mikami, H.J.Yoon, H.H.Lee, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 28.50 / 1.92
Space group P 3 2 1
Cell size a, b, c (Å), α, β, γ (°) 98.727, 98.727, 45.255, 90.00, 90.00, 120.00
R / Rfree (%) 15.6 / 18.2

Other elements in 3x30:

The structure of Crystal Structure of Metallo-Beta-Lactamase From Thermotoga Maritima also contains other interesting chemical elements:

Nickel (Ni) 1 atom

Manganese Binding Sites:

The binding sites of Manganese atom in the Crystal Structure of Metallo-Beta-Lactamase From Thermotoga Maritima (pdb code 3x30). This binding sites where shown within 5.0 Angstroms radius around Manganese atom.
In total only one binding site of Manganese was determined in the Crystal Structure of Metallo-Beta-Lactamase From Thermotoga Maritima, PDB code: 3x30:

Manganese binding site 1 out of 1 in 3x30

Go back to Manganese Binding Sites List in 3x30
Manganese binding site 1 out of 1 in the Crystal Structure of Metallo-Beta-Lactamase From Thermotoga Maritima


Mono view


Stereo pair view

A full contact list of Manganese with other atoms in the Mn binding site number 1 of Crystal Structure of Metallo-Beta-Lactamase From Thermotoga Maritima within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mn301

b:24.8
occ:1.00
OD2 A:ASP141 2.1 16.0 1.0
NE2 A:HIS53 2.2 17.7 1.0
O A:HOH524 2.2 18.7 1.0
NE2 A:HIS190 2.3 23.8 1.0
OD2 A:ASP52 2.4 21.3 1.0
O A:HOH557 2.4 19.3 1.0
CG A:ASP141 2.9 17.8 1.0
OD1 A:ASP141 2.9 18.3 1.0
CD2 A:HIS53 3.0 14.7 1.0
CE1 A:HIS190 3.2 22.1 1.0
CD2 A:HIS190 3.2 25.6 1.0
CE1 A:HIS53 3.3 15.6 1.0
CG A:ASP52 3.3 21.4 1.0
NI A:NI302 3.4 17.0 1.0
O A:HOH525 3.6 17.8 1.0
OD1 A:ASP52 3.6 20.4 1.0
NE2 A:HIS8 3.8 20.8 1.0
O A:HOH468 3.9 37.0 1.0
CG A:HIS53 4.2 16.4 1.0
ND1 A:HIS53 4.3 15.2 1.0
ND1 A:HIS190 4.3 23.3 1.0
NE2 A:HIS48 4.3 14.2 1.0
CB A:ASP141 4.3 15.2 1.0
CG A:HIS190 4.4 24.6 1.0
CE1 A:HIS48 4.4 17.7 1.0
CE1 A:HIS8 4.5 24.2 1.0
CB A:ASP52 4.7 18.6 1.0
O A:HOH556 4.7 31.4 1.0
CD2 A:HIS8 4.7 17.3 1.0

Reference:

H.J.Choi, H.J.Kim, A.Matsuura, B.Mikami, H.J.Yoon, H.H.Lee. Crystal Structure of Metallo-Beta-Lactamase From Thermotoga Maritima To Be Published.
Page generated: Tue Dec 15 04:17:34 2020

Last articles

Zn in 8WB0
Zn in 8WAX
Zn in 8WAU
Zn in 8WAZ
Zn in 8WAY
Zn in 8WAV
Zn in 8WAW
Zn in 8WAT
Zn in 8W7M
Zn in 8WD3
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy