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Manganese in PDB 3upq: Crystal Structure of the Pre-Catalytic Ternary Complex of Polymerase Lambda with An Ratp Analog Opposite A Templating T.
Enzymatic activity of Crystal Structure of the Pre-Catalytic Ternary Complex of Polymerase Lambda with An Ratp Analog Opposite A Templating T.
All present enzymatic activity of Crystal Structure of the Pre-Catalytic Ternary Complex of Polymerase Lambda with An Ratp Analog Opposite A Templating T.:
2.7.7.7;
2.7.7.7;
Protein crystallography data
The structure of Crystal Structure of the Pre-Catalytic Ternary Complex of Polymerase Lambda with An Ratp Analog Opposite A Templating T., PDB code: 3upq
was solved by
R.A.Gosavi,
A.F.Moon,
T.A.Kunkel,
L.C.Pedersen,
K.Bebenek,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
| Resolution Low / High (Å) | 27.44 / 1.95 |
| Space group | P 21 21 21 |
| Cell size a, b, c (Å), α, β, γ (°) | 55.975, 63.660, 139.970, 90.00, 90.00, 90.00 |
| R / Rfree (%) | 20.8 / 24.4 |
Other elements in 3upq:
The structure of Crystal Structure of the Pre-Catalytic Ternary Complex of Polymerase Lambda with An Ratp Analog Opposite A Templating T. also contains other interesting chemical elements:
| Sodium | (Na) | 1 atom |
Manganese Binding Sites:
The binding sites of Manganese atom in the Crystal Structure of the Pre-Catalytic Ternary Complex of Polymerase Lambda with An Ratp Analog Opposite A Templating T.
(pdb code 3upq). This binding sites where shown within
5.0 Angstroms radius around Manganese atom.
In total 3 binding sites of Manganese where determined in the Crystal Structure of the Pre-Catalytic Ternary Complex of Polymerase Lambda with An Ratp Analog Opposite A Templating T., PDB code: 3upq:
Jump to Manganese binding site number: 1; 2; 3;
In total 3 binding sites of Manganese where determined in the Crystal Structure of the Pre-Catalytic Ternary Complex of Polymerase Lambda with An Ratp Analog Opposite A Templating T., PDB code: 3upq:
Jump to Manganese binding site number: 1; 2; 3;
Manganese binding site 1 out of 3 in 3upq
Go back to
Manganese Binding Sites List in 3upq
Manganese binding site 1 out
of 3 in the Crystal Structure of the Pre-Catalytic Ternary Complex of Polymerase Lambda with An Ratp Analog Opposite A Templating T.
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Manganese with other atoms in the Mn binding
site number 1 of Crystal Structure of the Pre-Catalytic Ternary Complex of Polymerase Lambda with An Ratp Analog Opposite A Templating T. within 5.0Å range:
|
Manganese binding site 2 out of 3 in 3upq
Go back to
Manganese Binding Sites List in 3upq
Manganese binding site 2 out
of 3 in the Crystal Structure of the Pre-Catalytic Ternary Complex of Polymerase Lambda with An Ratp Analog Opposite A Templating T.
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Manganese with other atoms in the Mn binding
site number 2 of Crystal Structure of the Pre-Catalytic Ternary Complex of Polymerase Lambda with An Ratp Analog Opposite A Templating T. within 5.0Å range:
|
Manganese binding site 3 out of 3 in 3upq
Go back to
Manganese Binding Sites List in 3upq
Manganese binding site 3 out
of 3 in the Crystal Structure of the Pre-Catalytic Ternary Complex of Polymerase Lambda with An Ratp Analog Opposite A Templating T.
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Manganese with other atoms in the Mn binding
site number 3 of Crystal Structure of the Pre-Catalytic Ternary Complex of Polymerase Lambda with An Ratp Analog Opposite A Templating T. within 5.0Å range:
|
Reference:
R.A.Gosavi,
A.F.Moon,
T.A.Kunkel,
L.C.Pedersen,
K.Bebenek.
The Catalytic Cycle For Ribonucleotide Incorporation By Human Dna Pol Lambda Nucleic Acids Res. V. 40 7518 2012.
ISSN: ISSN 0305-1048
PubMed: 22584622
DOI: 10.1093/NAR/GKS413
Page generated: Sat Oct 5 18:08:34 2024
ISSN: ISSN 0305-1048
PubMed: 22584622
DOI: 10.1093/NAR/GKS413
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