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Manganese in PDB 3ulq: Crystal Structure of the Anti-Activator Rapf Complexed with the Response Regulator Coma Dna Binding Domain

Protein crystallography data

The structure of Crystal Structure of the Anti-Activator Rapf Complexed with the Response Regulator Coma Dna Binding Domain, PDB code: 3ulq was solved by M.D.Baker, M.B.Neiditch, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 19.76 / 2.30
Space group P 21 21 2
Cell size a, b, c (Å), α, β, γ (°) 115.304, 81.437, 78.346, 90.00, 90.00, 90.00
R / Rfree (%) 18.9 / 22.4

Manganese Binding Sites:

The binding sites of Manganese atom in the Crystal Structure of the Anti-Activator Rapf Complexed with the Response Regulator Coma Dna Binding Domain (pdb code 3ulq). This binding sites where shown within 5.0 Angstroms radius around Manganese atom.
In total only one binding site of Manganese was determined in the Crystal Structure of the Anti-Activator Rapf Complexed with the Response Regulator Coma Dna Binding Domain, PDB code: 3ulq:

Manganese binding site 1 out of 1 in 3ulq

Go back to Manganese Binding Sites List in 3ulq
Manganese binding site 1 out of 1 in the Crystal Structure of the Anti-Activator Rapf Complexed with the Response Regulator Coma Dna Binding Domain


Mono view


Stereo pair view

A full contact list of Manganese with other atoms in the Mn binding site number 1 of Crystal Structure of the Anti-Activator Rapf Complexed with the Response Regulator Coma Dna Binding Domain within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mn382

b:87.9
occ:1.00
O A:MET43 2.3 78.0 1.0
OE1 A:GLU45 2.3 69.2 1.0
O A:LEU40 2.3 67.9 1.0
CD A:GLU45 3.1 63.5 1.0
OE2 A:GLU45 3.2 60.2 1.0
C A:MET43 3.5 82.7 1.0
C A:LEU40 3.5 62.2 1.0
N A:MET43 4.3 90.4 1.0
N A:GLU44 4.3 92.6 1.0
N A:ASP41 4.4 75.3 1.0
CA A:GLU44 4.4 97.2 1.0
N A:GLU45 4.4 71.6 1.0
CA A:ASP41 4.4 77.1 1.0
CA A:LEU40 4.4 66.8 1.0
CA A:MET43 4.5 86.1 1.0
CG A:GLU45 4.5 65.5 1.0
CB A:LEU40 4.6 58.2 1.0
C A:ASP41 4.6 77.7 1.0
CG A:MET43 4.8 63.7 1.0
O A:ASP41 4.9 82.2 1.0
C A:GLU44 4.9 84.0 1.0

Reference:

M.D.Baker, M.B.Neiditch. Structural Basis of Response Regulator Inhibition By A Bacterial Anti-Activator Protein. Plos Biol. V. 9 01226 2011.
ISSN: ISSN 1544-9173
PubMed: 22215984
DOI: 10.1371/JOURNAL.PBIO.1001226
Page generated: Sat Oct 5 18:05:49 2024

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