Manganese in the structure of Crystal Structure of Bbbb+Udp+Gal With Glycerol As the Cryoprotectant (pdb 3sxc)

The binding sites of Manganese atom in the structure of Crystal Structure of Bbbb+Udp+Gal With Glycerol As the Cryoprotectant (pdb code 3sxc). This binding sites where shown with 5.0 Angstroms radius around Manganese atom. The 3sxc structure was solved by A.R.JOHAL, S.V.EVANS, with X-Ray Crystallography technique, brief refinement statistics is given in the table below: Resolution (A) 20.0-1.9 Space group C2221 a (A) 52.550 b (A) 149.880 c (A) 78.810 alpha (°) 90.00 beta (°) 90.00 gamma (°) 90.00 Rfactor (%) 17.8 Rfree (%) 22.8 Manganese Binding Sites: Manganese binding site 1 out of 1 in 3sxc Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 1 of Manganese in the PDB 3sxc. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Manganese atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: A: Asp211, A: Asp213, A: Ala268, A: Lys346, A: Udp1, conact list: Atom Atom Distance (A) Mn CB A:Asp211 3.53 Mn OD2 A:Asp211 2.34 Mn OD1 A:Asp211 4.29 Mn CG A:Asp211 3.23 Mn CA A:Asp211 4.98 Mn CB A:Asp213 4.73 Mn OD2 A:Asp213 3.10 Mn OD1 A:Asp213 2.53 Mn CG A:Asp213 3.23 Mn CB A:Ala268 4.99 Mn NZ A:Lys346 4.95 Mn O3B A:Udp1 2.24 Mn C3' A:Udp1 4.43 Mn PA A:Udp1 3.52 Mn O2A A:Udp1 4.67 Mn O1B A:Udp1 4.03 Mn PB A:Udp1 3.36 Mn O3' A:Udp1 3.78 Mn C5' A:Udp1 4.13 Mn C4' A:Udp1 4.66 Mn O5' A:Udp1 4.36 Mn O2B A:Udp1 4.71 Mn O3A A:Udp1 3.76 Mn O1A A:Udp1 2.24 interactive model: