Atomistry » Manganese » PDB 3rla-3sx3 » 3s23
Atomistry »
  Manganese »
    PDB 3rla-3sx3 »
      3s23 »

Manganese in PDB 3s23: Crystal Structure of Cerulenin Bound Xanthomonas Campestri Olea (Co- Crystal) Xe Derivative

Protein crystallography data

The structure of Crystal Structure of Cerulenin Bound Xanthomonas Campestri Olea (Co- Crystal) Xe Derivative, PDB code: 3s23 was solved by B.R.Goblirsch, C.M.Wilmot, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 31.75 / 1.95
Space group P 32 2 1
Cell size a, b, c (Å), α, β, γ (°) 90.027, 90.027, 69.513, 90.00, 90.00, 120.00
R / Rfree (%) 18 / 21.7

Other elements in 3s23:

The structure of Crystal Structure of Cerulenin Bound Xanthomonas Campestri Olea (Co- Crystal) Xe Derivative also contains other interesting chemical elements:

Xenon (Xe) 2 atoms

Manganese Binding Sites:

The binding sites of Manganese atom in the Crystal Structure of Cerulenin Bound Xanthomonas Campestri Olea (Co- Crystal) Xe Derivative (pdb code 3s23). This binding sites where shown within 5.0 Angstroms radius around Manganese atom.
In total 2 binding sites of Manganese where determined in the Crystal Structure of Cerulenin Bound Xanthomonas Campestri Olea (Co- Crystal) Xe Derivative, PDB code: 3s23:
Jump to Manganese binding site number: 1; 2;

Manganese binding site 1 out of 2 in 3s23

Go back to Manganese Binding Sites List in 3s23
Manganese binding site 1 out of 2 in the Crystal Structure of Cerulenin Bound Xanthomonas Campestri Olea (Co- Crystal) Xe Derivative


Mono view


Stereo pair view

A full contact list of Manganese with other atoms in the Mn binding site number 1 of Crystal Structure of Cerulenin Bound Xanthomonas Campestri Olea (Co- Crystal) Xe Derivative within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mn1

b:27.9
occ:0.78
OD1 A:ASP76 2.2 30.9 1.0
ND1 A:HIS38 2.3 45.9 1.0
CG A:ASP76 3.0 39.4 1.0
OD2 A:ASP76 3.2 45.6 1.0
CE1 A:HIS38 3.3 51.6 1.0
CG A:HIS38 3.3 44.9 1.0
CB A:HIS38 3.6 42.7 1.0
CA A:HIS38 4.1 39.4 1.0
CB A:ASP76 4.4 35.2 1.0
NE2 A:HIS38 4.4 47.6 1.0
CD2 A:HIS38 4.5 43.6 1.0
N A:HIS38 4.8 37.2 1.0
CA A:ASP76 5.0 33.1 1.0

Manganese binding site 2 out of 2 in 3s23

Go back to Manganese Binding Sites List in 3s23
Manganese binding site 2 out of 2 in the Crystal Structure of Cerulenin Bound Xanthomonas Campestri Olea (Co- Crystal) Xe Derivative


Mono view


Stereo pair view

A full contact list of Manganese with other atoms in the Mn binding site number 2 of Crystal Structure of Cerulenin Bound Xanthomonas Campestri Olea (Co- Crystal) Xe Derivative within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mn364

b:64.8
occ:0.86
CE A:LYS336 3.1 72.2 1.0
CD A:LYS336 3.2 71.9 1.0
CG A:LYS336 3.2 60.2 1.0
O A:TRP358 3.6 41.6 1.0
OXT A:TRP358 4.0 37.0 1.0
NZ A:LYS336 4.1 69.2 1.0
O A:ASP220 4.2 45.6 1.0
C A:TRP358 4.2 40.2 1.0
CB A:LYS336 4.3 56.5 1.0
N A:GLY337 4.7 44.7 1.0
C A:ASP220 4.7 50.4 1.0
CA A:ASP220 4.8 51.9 1.0
CA A:LYS336 4.9 52.5 1.0
O A:ALA221 4.9 36.7 1.0

Reference:

B.R.Goblirsch, J.A.Frias, L.P.Wackett, C.M.Wilmot. Crystal Structures of Xanthomonas Campestris Olea Reveal Features That Promote Head-to-Head Condensation of Two Long-Chain Fatty Acids. Biochemistry V. 51 4138 2012.
ISSN: ISSN 0006-2960
PubMed: 22524624
DOI: 10.1021/BI300386M
Page generated: Sat Oct 5 17:52:48 2024

Last articles

Zn in 9FS1
Zn in 9FS3
Zn in 9FS2
Zn in 9H3H
Zn in 9F29
Zn in 9F2A
Zn in 9EY2
Zn in 9F26
Zn in 9E8J
Zn in 9E8N
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy