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Manganese in PDB 3qb5: Human C3PO Complex in the Presence of MNSO4

Protein crystallography data

The structure of Human C3PO Complex in the Presence of MNSO4, PDB code: 3qb5 was solved by X.Ye, N.Huang, Y.Liu, Z.Paroo, S.Chen, H.Zhang, Q.Liu, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 29.86 / 2.95
Space group P 61 2 2
Cell size a, b, c (Å), α, β, γ (°) 98.166, 98.166, 446.466, 90.00, 90.00, 120.00
R / Rfree (%) 22.4 / 27.3

Other elements in 3qb5:

The structure of Human C3PO Complex in the Presence of MNSO4 also contains other interesting chemical elements:

Chlorine (Cl) 1 atom
Sodium (Na) 1 atom

Manganese Binding Sites:

The binding sites of Manganese atom in the Human C3PO Complex in the Presence of MNSO4 (pdb code 3qb5). This binding sites where shown within 5.0 Angstroms radius around Manganese atom.
In total only one binding site of Manganese was determined in the Human C3PO Complex in the Presence of MNSO4, PDB code: 3qb5:

Manganese binding site 1 out of 1 in 3qb5

Go back to Manganese Binding Sites List in 3qb5
Manganese binding site 1 out of 1 in the Human C3PO Complex in the Presence of MNSO4


Mono view


Stereo pair view

A full contact list of Manganese with other atoms in the Mn binding site number 1 of Human C3PO Complex in the Presence of MNSO4 within 5.0Å range:
probe atom residue distance (Å) B Occ
K:Mn291

b:75.4
occ:1.00
OE1 K:GLU197 2.5 77.5 1.0
OE1 K:GLU129 2.6 65.6 1.0
O1 K:SO4294 3.3 0.2 1.0
CD K:GLU197 3.4 76.0 1.0
O2 K:SO4294 3.4 0.8 1.0
CD K:GLU129 3.5 64.4 1.0
OE2 K:GLU129 3.6 66.0 1.0
S K:SO4294 3.8 0.3 1.0
O3 K:SO4294 3.9 0.2 1.0
CG K:GLU197 4.0 74.5 1.0
NH2 C:ARG192 4.1 77.5 1.0
OE2 K:GLU197 4.3 75.1 1.0
O2 K:SO4293 4.4 0.8 1.0
O1 K:SO4293 4.5 0.0 1.0
CD1 K:ILE71 4.6 79.4 1.0
O K:ASP193 4.7 72.9 1.0
NH1 K:ARG200 4.8 66.9 1.0
OE2 K:GLU126 4.8 78.4 1.0
CG K:GLU129 4.9 64.6 1.0

Reference:

X.Ye, N.Huang, Y.Liu, Z.Paroo, C.Huerta, P.Li, S.Chen, Q.Liu, H.Zhang. Structure of C3PO and Mechanism of Human Risc Activation. Nat.Struct.Mol.Biol. V. 18 650 2011.
ISSN: ISSN 1545-9993
PubMed: 21552258
DOI: 10.1038/NSMB.2032
Page generated: Sat Oct 5 17:40:06 2024

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