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Manganese in PDB 3pyz: Crystal Structure of Bifunctional Folylpolyglutamate Synthase/Dihydrofolate Synthase Complexed with Amppnp and Mn Ion From Yersinia Pestis C092

Enzymatic activity of Crystal Structure of Bifunctional Folylpolyglutamate Synthase/Dihydrofolate Synthase Complexed with Amppnp and Mn Ion From Yersinia Pestis C092

All present enzymatic activity of Crystal Structure of Bifunctional Folylpolyglutamate Synthase/Dihydrofolate Synthase Complexed with Amppnp and Mn Ion From Yersinia Pestis C092:
6.3.2.12; 6.3.2.17;

Protein crystallography data

The structure of Crystal Structure of Bifunctional Folylpolyglutamate Synthase/Dihydrofolate Synthase Complexed with Amppnp and Mn Ion From Yersinia Pestis C092, PDB code: 3pyz was solved by B.Nocek, M.Makowska-Grzyska, N.Maltseva, W.Anderson, A.Joachimiak, Centerfor Structural Genomics Of Infectious Diseases (Csgid), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 40.00 / 2.10
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 60.627, 77.713, 122.292, 90.00, 90.00, 90.00
R / Rfree (%) 17.6 / 22.8

Manganese Binding Sites:

The binding sites of Manganese atom in the Crystal Structure of Bifunctional Folylpolyglutamate Synthase/Dihydrofolate Synthase Complexed with Amppnp and Mn Ion From Yersinia Pestis C092 (pdb code 3pyz). This binding sites where shown within 5.0 Angstroms radius around Manganese atom.
In total only one binding site of Manganese was determined in the Crystal Structure of Bifunctional Folylpolyglutamate Synthase/Dihydrofolate Synthase Complexed with Amppnp and Mn Ion From Yersinia Pestis C092, PDB code: 3pyz:

Manganese binding site 1 out of 1 in 3pyz

Go back to Manganese Binding Sites List in 3pyz
Manganese binding site 1 out of 1 in the Crystal Structure of Bifunctional Folylpolyglutamate Synthase/Dihydrofolate Synthase Complexed with Amppnp and Mn Ion From Yersinia Pestis C092


Mono view


Stereo pair view

A full contact list of Manganese with other atoms in the Mn binding site number 1 of Crystal Structure of Bifunctional Folylpolyglutamate Synthase/Dihydrofolate Synthase Complexed with Amppnp and Mn Ion From Yersinia Pestis C092 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mn501

b:25.4
occ:0.70
 OE2 A:GLU146 1.9 34.1 1.0
O2G A:ANP601 1.9 34.1 1.0
O A:HOH498 1.9 39.0 1.0
O A:SER83 2.0 35.4 1.0
O2B A:ANP601 2.1 31.8 1.0
O A:HOH496 2.1 40.0 1.0
CD A:GLU146 3.0 36.8 1.0
PG A:ANP601 3.3 40.2 1.0
OE1 A:GLU146 3.3 42.3 1.0
C A:SER83 3.3 35.8 1.0
PB A:ANP601 3.4 29.0 1.0
N3B A:ANP601 3.5 32.8 1.0
O A:HOH529 3.8 57.6 1.0
CD A:PRO84 3.9 37.1 1.0
N A:PRO84 4.1 36.0 1.0
O A:HOH485 4.2 40.5 1.0
O3G A:ANP601 4.3 44.9 1.0
O1B A:ANP601 4.3 27.9 1.0
CG A:GLU146 4.3 35.1 1.0
O1G A:ANP601 4.3 41.6 1.0
N A:SER83 4.4 36.5 1.0
N A:GLY61 4.4 33.8 1.0
NH1 A:ARG301 4.4 42.9 1.0
CA A:SER83 4.5 35.3 1.0
CE A:LYS60 4.5 32.8 1.0
O2A A:ANP601 4.5 35.6 1.0
CA A:GLY61 4.6 34.1 1.0
O3A A:ANP601 4.7 33.5 1.0
CB A:LYS60 4.8 32.9 1.0
NZ A:LYS60 4.8 36.1 1.0

Reference:

B.Nocek, M.Makowska-Grzyska, N.Maltseva, W.Anderson, A.Joachimiak, Center For Structural Genomics Of Infectious Diseases(Csgid). Crystal Structure of Bifunctional Folylpolyglutamate Synthase/Dihydrofolate Synthase Complexed with Amppnp and Mn Ion From Yersinia Pestis C092 To Be Published.
Page generated: Tue Dec 15 04:14:06 2020

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