Manganese in PDB 3oum: Crystal Structure of Toxoflavin-Degrading Enzyme in Complex with Toxoflavin

The structure of Crystal Structure of Toxoflavin-Degrading Enzyme in Complex with Toxoflavin, PDB code: 3oum was solved by M.I.Kim, S.Rhee, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	50.00 / 2.00
Space group	H 3
Cell size a, b, c (Å), α, β, γ (°)	111.008, 111.008, 57.438, 90.00, 90.00, 120.00
R / Rfree (%)	21.9 / 25.7

The binding sites of Manganese atom in the Crystal Structure of Toxoflavin-Degrading Enzyme in Complex with Toxoflavin (pdb code 3oum). This binding sites where shown within 5.0 Angstroms radius around Manganese atom.
In total only one binding site of Manganese was determined in the Crystal Structure of Toxoflavin-Degrading Enzyme in Complex with Toxoflavin, PDB code: 3oum:

Manganese binding site 1 out of 1 in the Crystal Structure of Toxoflavin-Degrading Enzyme in Complex with Toxoflavin


Mono view


Stereo pair view

A full contact list of Manganese with other atoms in the Mn binding site number 1 of Crystal Structure of Toxoflavin-Degrading Enzyme in Complex with Toxoflavin within 5.0Å range: probe atom residue distance (Å) B Occ A:Mn233 b:40.6 occ:1.00 OE1 A:GLU113 2.2 14.0 1.0 OE1 A:GLU138 2.2 15.5 1.0 NE2 A:HIS60 2.4 23.8 1.0 O1 A:TOF234 2.4 28.5 1.0 O A:HOH254 2.5 27.9 1.0 CD A:GLU113 3.0 11.3 1.0 CE1 A:HIS60 3.0 26.9 1.0 OE2 A:GLU113 3.2 13.3 1.0 C1 A:TOF234 3.2 32.8 1.0 CD A:GLU138 3.2 19.1 1.0 CD2 A:HIS60 3.5 22.5 1.0 N3 A:TOF234 3.6 33.5 1.0 OE2 A:GLU138 3.7 24.1 1.0 C2 A:TOF234 3.8 32.4 1.0 CB A:ALA62 4.2 11.9 1.0 OH A:TYR103 4.2 18.4 1.0 ND1 A:HIS60 4.3 25.0 1.0 N10 A:TOF234 4.3 32.9 1.0 CD2 A:LEU181 4.4 24.1 1.0 CG A:GLU113 4.4 13.4 1.0 CG A:GLU138 4.5 17.4 1.0 CE2 A:TYR103 4.5 16.0 1.0 CG A:HIS60 4.5 21.4 1.0 C12 A:TOF234 4.6 32.0 1.0 CB A:GLU138 4.6 14.7 1.0 CB A:GLU113 4.8 14.3 1.0 C4 A:TOF234 4.8 34.5 1.0 CZ A:TYR103 4.8 19.1 1.0

W.S.Jung, J.Lee, M.I.Kim, J.Ma, T.Nagamatsu, E.Goo, H.Kim, I.Hwang, J.Han, S.Rhee. Structural and Functional Analysis of Phytotoxin Toxoflavin-Degrading Enzyme Plos One V. 6 22443 2011.
ISSN: ESSN 1932-6203
PubMed: 21799856
DOI: 10.1371/JOURNAL.PONE.0022443