Atomistry » Manganese » PDB 3m0m-3n37 » 3n36
Atomistry »
  Manganese »
    PDB 3m0m-3n37 »
      3n36 »

Manganese in PDB 3n36: Erythrina Corallodendron Lectin Mutant (Y106G) in Complex with Galactose

Protein crystallography data

The structure of Erythrina Corallodendron Lectin Mutant (Y106G) in Complex with Galactose, PDB code: 3n36 was solved by S.Thamotharan, T.Karthikeyan, K.A.Kulkarni, K.N.Shetty, A.Surolia, M.Vijayan, K.Suguna, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 29.61 / 2.30
Space group P 31 2 1
Cell size a, b, c (Å), α, β, γ (°) 102.584, 102.584, 57.112, 90.00, 90.00, 120.00
R / Rfree (%) 17.7 / 20.8

Other elements in 3n36:

The structure of Erythrina Corallodendron Lectin Mutant (Y106G) in Complex with Galactose also contains other interesting chemical elements:

Calcium (Ca) 1 atom

Manganese Binding Sites:

The binding sites of Manganese atom in the Erythrina Corallodendron Lectin Mutant (Y106G) in Complex with Galactose (pdb code 3n36). This binding sites where shown within 5.0 Angstroms radius around Manganese atom.
In total only one binding site of Manganese was determined in the Erythrina Corallodendron Lectin Mutant (Y106G) in Complex with Galactose, PDB code: 3n36:

Manganese binding site 1 out of 1 in 3n36

Go back to Manganese Binding Sites List in 3n36
Manganese binding site 1 out of 1 in the Erythrina Corallodendron Lectin Mutant (Y106G) in Complex with Galactose


Mono view


Stereo pair view

A full contact list of Manganese with other atoms in the Mn binding site number 1 of Erythrina Corallodendron Lectin Mutant (Y106G) in Complex with Galactose within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mn289

b:19.6
occ:1.00
OE2 A:GLU127 2.2 17.5 1.0
OD2 A:ASP129 2.3 16.9 1.0
O A:HOH243 2.4 11.8 1.0
O A:HOH244 2.4 17.2 1.0
NE2 A:HIS142 2.4 17.1 1.0
OD1 A:ASP136 2.4 21.4 1.0
CD A:GLU127 3.1 17.8 1.0
CG A:ASP136 3.3 19.8 1.0
CE1 A:HIS142 3.3 17.4 1.0
CG A:ASP129 3.3 18.3 1.0
OE1 A:GLU127 3.4 16.1 1.0
CD2 A:HIS142 3.5 16.3 1.0
OD2 A:ASP136 3.6 15.8 1.0
CB A:ASP129 3.7 17.5 1.0
O A:HOH246 4.0 14.6 1.0
OG A:SER152 4.2 14.7 1.0
CA A:CA290 4.3 18.7 1.0
OD1 A:ASP129 4.4 20.2 1.0
ND1 A:HIS142 4.4 16.6 1.0
O A:ILE150 4.5 16.1 1.0
CB A:ASP136 4.5 19.3 1.0
CG A:GLU127 4.5 16.3 1.0
O A:HOH250 4.5 15.4 1.0
CG A:HIS142 4.6 15.4 1.0
NE1 A:TRP135 4.8 21.2 1.0
CD A:PRO137 4.8 22.6 1.0
CD1 A:TRP135 5.0 21.1 1.0

Reference:

S.Thamotharan, T.Karthikeyan, K.A.Kulkarni, K.N.Shetty, A.Surolia, M.Vijayan, K.Suguna. Modification of the Sugar Specificity of A Plant Lectin: Structural Studies on A Point Mutant of Erythrina Corallodendron Lectin. Acta Crystallogr.,Sect.D V. 67 218 2011.
ISSN: ISSN 0907-4449
PubMed: 21358053
DOI: 10.1107/S0907444911004525
Page generated: Tue Dec 15 04:12:48 2020

Last articles

Zn in 8WB0
Zn in 8WAX
Zn in 8WAU
Zn in 8WAZ
Zn in 8WAY
Zn in 8WAV
Zn in 8WAW
Zn in 8WAT
Zn in 8W7M
Zn in 8WD3
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy