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Manganese in PDB 3lw6: Crystal Structure of Drosophila BETA1,4-Galactosyltransferase-7

Enzymatic activity of Crystal Structure of Drosophila BETA1,4-Galactosyltransferase-7

All present enzymatic activity of Crystal Structure of Drosophila BETA1,4-Galactosyltransferase-7:
2.4.1.133;

Protein crystallography data

The structure of Crystal Structure of Drosophila BETA1,4-Galactosyltransferase-7, PDB code: 3lw6 was solved by B.Ramakrishnan, P.K.Qasba, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 36.60 / 1.81
Space group P 43 21 2
Cell size a, b, c (Å), α, β, γ (°) 81.835, 81.835, 133.656, 90.00, 90.00, 90.00
R / Rfree (%) 18.9 / 22.1

Manganese Binding Sites:

The binding sites of Manganese atom in the Crystal Structure of Drosophila BETA1,4-Galactosyltransferase-7 (pdb code 3lw6). This binding sites where shown within 5.0 Angstroms radius around Manganese atom.
In total only one binding site of Manganese was determined in the Crystal Structure of Drosophila BETA1,4-Galactosyltransferase-7, PDB code: 3lw6:

Manganese binding site 1 out of 1 in 3lw6

Go back to Manganese Binding Sites List in 3lw6
Manganese binding site 1 out of 1 in the Crystal Structure of Drosophila BETA1,4-Galactosyltransferase-7


Mono view


Stereo pair view

A full contact list of Manganese with other atoms in the Mn binding site number 1 of Crystal Structure of Drosophila BETA1,4-Galactosyltransferase-7 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mn314

b:24.6
occ:1.00
O1B A:UDP312 2.0 24.7 1.0
OD2 A:ASP147 2.1 25.8 1.0
O1A A:UDP312 2.2 21.9 1.0
ND1 A:HIS243 2.2 24.1 1.0
NE2 A:HIS241 2.3 24.6 1.0
O A:HOH386 2.3 24.3 1.0
CE1 A:HIS243 3.1 25.5 1.0
CG A:ASP147 3.1 25.9 1.0
CE1 A:HIS241 3.2 31.2 1.0
PB A:UDP312 3.3 24.5 1.0
CD2 A:HIS241 3.3 25.2 1.0
PA A:UDP312 3.3 24.9 1.0
OD1 A:ASP147 3.3 25.2 1.0
CG A:HIS243 3.4 28.6 1.0
O3A A:UDP312 3.5 25.6 1.0
CB A:HIS243 3.8 27.0 1.0
O3B A:UDP312 3.9 27.1 1.0
O3' A:UDP312 4.1 23.7 1.0
NH2 A:ARG250 4.1 25.9 1.0
O2A A:UDP312 4.2 23.4 1.0
NE2 A:HIS243 4.3 26.8 1.0
O A:HOH372 4.3 31.1 1.0
ND1 A:HIS241 4.3 29.6 1.0
O A:HOH494 4.3 35.2 1.0
O A:HOH7 4.4 34.9 1.0
CD2 A:HIS243 4.4 26.8 1.0
CG A:HIS241 4.4 29.4 1.0
CB A:ASP147 4.5 27.0 1.0
O2B A:UDP312 4.5 24.4 1.0
O5' A:UDP312 4.5 23.2 1.0
C3' A:UDP312 4.7 21.3 1.0
C5' A:UDP312 4.8 19.9 1.0

Reference:

B.Ramakrishnan, P.K.Qasba. Crystal Structure of the Catalytic Domain of Drosophila BETA1,4-Galactosyltransferase-7. J.Biol.Chem. V. 285 15619 2010.
ISSN: ISSN 0021-9258
PubMed: 20236943
DOI: 10.1074/JBC.M109.099564
Page generated: Tue Dec 15 04:11:58 2020

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