Chemical elements
  Manganese
    Isotopes
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    Physical properties
    PDB 117e-1cs0
    PDB 1cvn-1fbg
    PDB 1fe1-1gz9
    PDB 1gzc-1j53
    PDB 1j54-1kx3
    PDB 1kx4-1mav
    PDB 1mb0-1nvm
    PDB 1nxd-1pj2
    PDB 1pj3-1r8b
    PDB 1r8c-1tc2
    PDB 1tei-1vby
    PDB 1vew-1xid
    PDB 1xie-1za0
    PDB 1zao-2ah9
    PDB 2akw-2brl
    PDB 2bvl-2dvb
    PDB 2dvd-2g38
    PDB 2g4i-2ify
    PDB 2iie-2mnr
    PDB 2muc-2p9a
    PDB 2pal-2r21
    PDB 2r22-2vqr
    PDB 2vs3-2z87
    PDB 2zad-3bso
    PDB 3bu0-3e7b
    PDB 3e8q-3g82
    PDB 3gbc-3ilm
      3gbc
      3gbr
      3gdq
      3gfz
      3gg0
      3gg7
      3gme
      3gmz
      3gn0
      3gnx
      3go3
      3god
      3gve
      3gx6
      3h0r
      3h5x
      3h5y
      3h60
      3h61
      3h62
      3h63
      3h64
      3h8f
      3h8g
      3hb3
      3hb9
      3hbl
      3hi6
      3hix
      3hmk
      3ho8
      3hot
      3hq1
      3hqr
      3hvq
      3hw6
      3hyf
      3i0f
      3i0g
      3i3m
      3i3q
      3i9v
      3ib7
      3ib8
      3idb
      3idc
      3idu
      3ig1
      3ig4
      3ilm
    PDB 3ioi-3lp0
    PDB 3lp1-3n25
    PDB 3n37-3pvb
    PDB 3py5-3tmy
    PDB 3twz-4e5f
    PDB 4e5g-8icv
    PDB 8icw-9xim

Manganese in the structure of Crystal Structure of Gtb C80S/C196S + Udp + H Antigen (pdb 3i0f)






The binding sites of Manganese atom in the structure of Crystal Structure of Gtb C80S/C196S + Udp + H Antigen (pdb code 3i0f). This binding sites where shown with 5.0 Angstroms radius around Manganese atom.
The 3i0f structure was solved by B.SCHUMAN, M.PERSSON, R.C.LANDRY, R.POLAKOWSKI, J.T.WEADGE, N.O.L.SETO, S.BORISOVA, M.M.PALCIC, S.V.EVANS, with X-Ray Crystallography technique, brief refinement statistics is given in the table below:
Resolution (A)19.9-1.6
Space groupC2221
a (A)52.459
b (A)149.350
c (A)79.584
alpha (°)90.00
beta (°)90.00
gamma (°)90.00
Rfactor (%)18.9
Rfree (%)21.7


Manganese Binding Sites:

Manganese binding site 1 out of 1 in 3i0f


Manganese binding site 1 out of 1 in 3i0f
Click to enlarge
stereopicture of Manganese binding site 1 out of 1 in 3i0f
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 1 of Manganese in the PDB 3i0f. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Manganese atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Asp211, A: Asp213, A: Met214, A: Ala268, A: Lys346, A: Udp357, A: Hoh30, A: Hoh56, A: Hoh383, A: Hoh385, A: Hoh446,

conact list:


AtomAtomDistance (A)
MnCB A:Asp2113.71
MnOD2 A:Asp2112.22
MnOD1 A:Asp2114.35
MnCG A:Asp2113.33
MnO A:Asp2134.89
MnCB A:Asp2134.24
MnOD2 A:Asp2132.23
MnOD1 A:Asp2132.41
MnCG A:Asp2132.72
MnSD A:Met2144.90
MnCB A:Ala2684.99
MnCE A:Lys3464.83
MnNZ A:Lys3464.11
MnO3B A:Udp3571.99
MnC3' A:Udp3574.60
MnPA A:Udp3573.31
MnO2A A:Udp3572.34
MnO1B A:Udp3574.66
MnPB A:Udp3573.37
MnO3' A:Udp3573.81
MnC5' A:Udp3574.20
MnC4' A:Udp3574.87
MnO5' A:Udp3574.27
MnO2B A:Udp3574.00
MnO3A A:Udp3573.54
MnO1A A:Udp3574.79
MnO A:Hoh302.17
MnO A:Hoh564.98
MnO A:Hoh3834.75
MnO A:Hoh3854.18
MnO A:Hoh4464.21

interactive model:




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