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    PDB 117e-1cs0
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Manganese in the structure of PHD2:Mn:Nog:HIF1-Alpha Substrate Complex (pdb 3hqr)

The binding sites of Manganese atom in the structure of PHD2:Mn:Nog:HIF1-Alpha Substrate Complex (pdb code 3hqr). This binding sites where shown with 5.0 Angstroms radius around Manganese atom.
The 3hqr structure was solved by R.CHOWDHURY, M.A.MCDONOUGH, C.J.SCHOFIELD, with X-Ray Crystallography technique, brief refinement statistics is given in the table below:
Resolution (A)34.2-2.0
Space groupP212121
a (A)39.379
b (A)68.798
c (A)72.221
alpha (°)90.00
beta (°)90.00
gamma (°)90.00
Rfactor (%)23.4
Rfree (%)24.8

Manganese Binding Sites:

Manganese binding site 1 out of 1 in 3hqr

Manganese binding site 1 out of 1 in 3hqr
Click to enlarge
stereopicture of Manganese binding site 1 out of 1 in 3hqr
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 1 of Manganese in the PDB 3hqr. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Manganese atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Tyr310, A: His313, A: Asp315, A: Phe366, A: His374, A: Trp389, S: Pro564, A: Oga600, A: Hoh1006, A: Hoh1011,

conact list:

AtomAtomDistance (A)
MnCE2 A:Tyr3104.82
MnCD2 A:Tyr3104.98
MnNE2 A:His3132.06
MnND1 A:His3134.12
MnCD2 A:His3133.09
MnCE1 A:His3132.99
MnCG A:His3134.20
MnN A:Asp3154.64
MnCB A:Asp3154.25
MnOD2 A:Asp3153.19
MnOD1 A:Asp3151.96
MnCG A:Asp3152.90
MnCA A:Asp3154.56
MnCZ A:Phe3664.58
MnNE2 A:His3741.94
MnND1 A:His3743.98
MnCD2 A:His3743.01
MnCE1 A:His3742.84
MnCG A:His3744.09
MnCZ2 A:Trp3894.85
MnCB S:Pro5644.76
MnCD S:Pro5644.34
MnCG S:Pro5644.18
MnN1 A:Oga6004.03
MnO2 A:Oga6002.43
MnC4 A:Oga6004.60
MnC1 A:Oga6002.98
MnO1 A:Oga6004.15
MnO2' A:Oga6002.01
MnC2 A:Oga6002.79
MnO A:Hoh10064.24
MnO A:Hoh10112.20

interactive model:

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