Atomistry » Manganese » PDB 3ebc-3g0a » 3fhi
Atomistry »
  Manganese »
    PDB 3ebc-3g0a »
      3fhi »

Manganese in PDB 3fhi: Crystal Structure of A Complex Between the Catalytic and Regulatory (Ri{Alpha}) Subunits of Pka

Enzymatic activity of Crystal Structure of A Complex Between the Catalytic and Regulatory (Ri{Alpha}) Subunits of Pka

All present enzymatic activity of Crystal Structure of A Complex Between the Catalytic and Regulatory (Ri{Alpha}) Subunits of Pka:
2.7.11.11;

Protein crystallography data

The structure of Crystal Structure of A Complex Between the Catalytic and Regulatory (Ri{Alpha}) Subunits of Pka, PDB code: 3fhi was solved by C.Kim, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 20.00 / 2.00
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 54.453, 93.017, 122.043, 90.00, 90.00, 90.00
R / Rfree (%) 19.8 / 22.6

Manganese Binding Sites:

The binding sites of Manganese atom in the Crystal Structure of A Complex Between the Catalytic and Regulatory (Ri{Alpha}) Subunits of Pka (pdb code 3fhi). This binding sites where shown within 5.0 Angstroms radius around Manganese atom.
In total 2 binding sites of Manganese where determined in the Crystal Structure of A Complex Between the Catalytic and Regulatory (Ri{Alpha}) Subunits of Pka, PDB code: 3fhi:
Jump to Manganese binding site number: 1; 2;

Manganese binding site 1 out of 2 in 3fhi

Go back to Manganese Binding Sites List in 3fhi
Manganese binding site 1 out of 2 in the Crystal Structure of A Complex Between the Catalytic and Regulatory (Ri{Alpha}) Subunits of Pka


Mono view


Stereo pair view

A full contact list of Manganese with other atoms in the Mn binding site number 1 of Crystal Structure of A Complex Between the Catalytic and Regulatory (Ri{Alpha}) Subunits of Pka within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mn401

b:2.0
occ:1.00
OD1 A:ASP184 1.8 43.6 1.0
O A:HOH416 1.9 33.9 1.0
OD1 A:ASN171 2.0 44.4 1.0
O2A A:ANP400 2.1 26.5 1.0
O2G A:ANP400 2.2 24.8 1.0
N3B A:ANP400 2.8 21.1 1.0
CG A:ASP184 2.9 44.7 1.0
CG A:ASN171 3.0 42.7 1.0
PG A:ANP400 3.0 21.3 1.0
ND2 A:ASN171 3.4 40.2 1.0
PA A:ANP400 3.4 24.4 1.0
CB A:ASP184 3.5 43.9 1.0
PB A:ANP400 3.7 20.3 1.0
O1G A:ANP400 3.8 17.4 1.0
O3A A:ANP400 3.8 23.8 1.0
OD2 A:ASP184 3.9 43.1 1.0
MN A:MN402 4.0 2.0 1.0
CE A:LYS168 4.1 43.6 1.0
O2B A:ANP400 4.1 22.1 1.0
O3G A:ANP400 4.3 14.8 1.0
NZ A:LYS168 4.3 43.0 1.0
OD1 A:ASP166 4.3 47.0 1.0
O3' A:ANP400 4.4 24.4 1.0
CB A:ASN171 4.4 41.9 1.0
O1A A:ANP400 4.4 26.2 1.0
O5' A:ANP400 4.5 23.0 1.0
C5' A:ANP400 4.6 22.4 1.0
C3' A:ANP400 4.8 24.8 1.0
CA A:ASN171 4.8 42.1 1.0
O A:GLU170 4.9 41.3 1.0
O A:HOH497 4.9 53.6 1.0
CA A:ASP184 4.9 44.0 1.0

Manganese binding site 2 out of 2 in 3fhi

Go back to Manganese Binding Sites List in 3fhi
Manganese binding site 2 out of 2 in the Crystal Structure of A Complex Between the Catalytic and Regulatory (Ri{Alpha}) Subunits of Pka


Mono view


Stereo pair view

A full contact list of Manganese with other atoms in the Mn binding site number 2 of Crystal Structure of A Complex Between the Catalytic and Regulatory (Ri{Alpha}) Subunits of Pka within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mn402

b:2.0
occ:1.00
O1G A:ANP400 1.9 17.4 1.0
OD2 A:ASP184 2.1 43.1 1.0
O A:HOH372 2.2 32.7 1.0
O2B A:ANP400 2.2 22.1 1.0
O A:HOH356 2.3 37.7 1.0
OD1 A:ASP184 2.7 43.6 1.0
CG A:ASP184 2.7 44.7 1.0
PG A:ANP400 3.2 21.3 1.0
PB A:ANP400 3.3 20.3 1.0
N3B A:ANP400 3.6 21.1 1.0
O2G A:ANP400 3.7 24.8 1.0
MN A:MN401 4.0 2.0 1.0
CD2 A:PHE54 4.0 39.3 1.0
OD1 A:ASP166 4.0 47.0 1.0
CB A:ASP184 4.2 43.9 1.0
O A:HOH366 4.3 40.7 1.0
NZ A:LYS72 4.3 37.9 1.0
CA A:GLY186 4.3 43.5 1.0
O1B A:ANP400 4.4 21.0 1.0
CE2 A:PHE54 4.5 39.2 1.0
O3A A:ANP400 4.5 23.8 1.0
O3G A:ANP400 4.5 14.8 1.0
N A:GLY186 4.6 44.0 1.0
O2A A:ANP400 4.7 26.5 1.0
CB B:ALA97 4.7 34.8 1.0
PA A:ANP400 4.8 24.4 1.0
CA A:ASP184 4.9 44.0 1.0
O1A A:ANP400 4.9 26.2 1.0
O A:HOH452 5.0 40.9 1.0
CZ A:PHE187 5.0 42.6 1.0

Reference:

C.Kim, N.H.Xuong, S.S.Taylor. Crystal Structure of A Complex Between the Catalytic and Regulatory (Rialpha) Subunits of Pka. Science V. 307 690 2005.
ISSN: ISSN 0036-8075
PubMed: 15692043
DOI: 10.1126/SCIENCE.1104607
Page generated: Tue Dec 15 04:09:34 2020

Last articles

Zn in 8WB0
Zn in 8WAX
Zn in 8WAU
Zn in 8WAZ
Zn in 8WAY
Zn in 8WAV
Zn in 8WAW
Zn in 8WAT
Zn in 8W7M
Zn in 8WD3
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy