Manganese in the structure of Structure of N141A Hincii With Cognate Dna (pdb 3ebc)

The binding sites of Manganese atom in the structure of Structure of N141A Hincii With Cognate Dna (pdb code 3ebc). This binding sites where shown with 5.0 Angstroms radius around Manganese atom. The 3ebc structure was solved by E.J.LITTLE, A.C.BABIC, N.C.HORTON, with X-Ray Crystallography technique, brief refinement statistics is given in the table below: Resolution (A) 43.6-2.5 Space group P1211 a (A) 46.551 b (A) 91.571 c (A) 70.594 alpha (°) 90.00 beta (°) 107.46 gamma (°) 90.00 Rfactor (%) 19.1 Rfree (%) 27.9 Manganese Binding Sites: Manganese binding site 1 out of 1 in 3ebc Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 1 of Manganese in the PDB 3ebc. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Manganese atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: A: Glu38, A: Asp114, A: Val128, F: Dc7, F: Dg8, A: Hoh330, A: Hoh385, A: Hoh399, F: Hoh76, F: Hoh323, conact list: Atom Atom Distance (A) Mn OE1 A:Glu38 4.84 Mn OE2 A:Glu38 4.28 Mn CD A:Glu38 4.80 Mn CB A:Asp114 4.40 Mn OD2 A:Asp114 2.24 Mn OD1 A:Asp114 3.12 Mn CG A:Asp114 3.00 Mn CA A:Asp114 4.93 Mn O A:Val128 4.42 Mn O3' F:Dc7 4.86 Mn OP1 F:Dg8 2.79 Mn P F:Dg8 4.11 Mn O5' F:Dg8 4.32 Mn O A:Hoh330 4.49 Mn O A:Hoh385 2.63 Mn O A:Hoh399 1.81 Mn O F:Hoh76 4.25 Mn O F:Hoh323 4.78 interactive model: