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Manganese in PDB 3c0q: Uvde E175A

Protein crystallography data

The structure of Uvde E175A, PDB code: 3c0q was solved by E.M.Meulenbroek, K.Paspaleva, E.A.J.Thomassen, J.P.Abrahams, N.Goosen, N.S.Pannu, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 35.03 / 2.74
Space group P 61 2 2
Cell size a, b, c (Å), α, β, γ (°) 113.380, 113.380, 89.080, 90.00, 90.00, 120.00
R / Rfree (%) 19.8 / 24.5

Manganese Binding Sites:

The binding sites of Manganese atom in the Uvde E175A (pdb code 3c0q). This binding sites where shown within 5.0 Angstroms radius around Manganese atom.
In total only one binding site of Manganese was determined in the Uvde E175A, PDB code: 3c0q:

Manganese binding site 1 out of 1 in 3c0q

Go back to Manganese Binding Sites List in 3c0q
Manganese binding site 1 out of 1 in the Uvde E175A


Mono view


Stereo pair view

A full contact list of Manganese with other atoms in the Mn binding site number 1 of Uvde E175A within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mn283

b:74.3
occ:1.00
NE2 A:HIS203 2.3 13.0 1.0
NE2 A:HIS244 2.4 16.6 1.0
CD2 A:HIS203 3.1 13.7 1.0
CE1 A:HIS244 3.3 16.3 1.0
CE1 A:HIS203 3.3 13.1 1.0
CD2 A:HIS244 3.3 17.0 1.0
O A:GLY242 3.6 16.0 1.0
O A:HOH298 3.8 6.4 1.0
CG A:HIS203 4.2 13.5 1.0
ND1 A:HIS203 4.3 13.5 1.0
CD2 A:LEU202 4.3 12.2 1.0
OE2 A:GLU178 4.3 30.2 1.0
ND1 A:HIS244 4.4 16.4 1.0
CG A:HIS244 4.4 15.8 1.0
OD1 A:ASP200 4.6 14.3 1.0
OD2 A:ASP200 4.7 15.3 1.0
C A:GLY242 4.7 17.0 1.0
OE1 A:GLU269 4.7 17.0 1.0
OE1 A:GLU178 4.9 29.2 1.0
CD A:GLU178 4.9 30.0 1.0
CG A:ASP200 5.0 13.5 1.0

Reference:

E.M.Meulenbroek, K.Paspaleva, E.A.Thomassen, J.P.Abrahams, N.Goosen, N.S.Pannu. Involvement of A Carboxylated Lysine in Uv Damage Endonuclease Protein Sci. V. 18 549 2009.
ISSN: ISSN 0961-8368
PubMed: 19241382
DOI: 10.1002/PRO.54
Page generated: Tue Dec 15 04:08:20 2020

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