Manganese binding site 1 out of 8 in 2z86
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 Click to enlarge |  Click to enlarge | Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 1 of Manganese in the PDB 2z86. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Manganese atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: A: Arg161, A: Asp239, A: Asp241, A: His386, A: Uga683, A: Hoh790, |
conact list:
Atom | Atom | Distance (A) | Mn | CZ A:Arg161 | 4.19 | Mn | NH2 A:Arg161 | 3.14 | Mn | NH1 A:Arg161 | 4.36 | Mn | OD2 A:Asp239 | 4.52 | Mn | CB A:Asp241 | 4.40 | Mn | OD2 A:Asp241 | 2.51 | Mn | OD1 A:Asp241 | 3.31 | Mn | CG A:Asp241 | 3.15 | Mn | NE2 A:His386 | 2.24 | Mn | ND1 A:His386 | 4.05 | Mn | CD2 A:His386 | 3.35 | Mn | CE1 A:His386 | 2.89 | Mn | CG A:His386 | 4.30 | Mn | O3B A:Uga683 | 4.28 | Mn | C5D A:Uga683 | 4.83 | Mn | PA A:Uga683 | 3.39 | Mn | O2B A:Uga683 | 4.65 | Mn | O3A A:Uga683 | 3.74 | Mn | O5D A:Uga683 | 4.62 | Mn | O2A A:Uga683 | 4.25 | Mn | O1B A:Uga683 | 2.18 | Mn | C1' A:Uga683 | 4.79 | Mn | PB A:Uga683 | 3.44 | Mn | O1A A:Uga683 | 2.18 | Mn | O A:Hoh790 | 2.96 |
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Manganese binding site 2 out of 8 in 2z86
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 Click to enlarge |  Click to enlarge | Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 2 of Manganese in the PDB 2z86. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Manganese atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: A: Asp521, A: Asp522, A: Val629, A: His631, A: Uga684, |
conact list:
Atom | Atom | Distance (A) | Mn | CB A:Asp521 | 4.34 | Mn | OD2 A:Asp521 | 2.51 | Mn | OD1 A:Asp521 | 2.73 | Mn | CG A:Asp521 | 2.92 | Mn | OD2 A:Asp522 | 4.55 | Mn | OD1 A:Asp522 | 4.09 | Mn | CG A:Asp522 | 4.70 | Mn | O A:Val629 | 4.12 | Mn | NE2 A:His631 | 4.65 | Mn | CE1 A:His631 | 4.01 | Mn | O3B A:Uga684 | 4.83 | Mn | C5D A:Uga684 | 4.96 | Mn | PA A:Uga684 | 3.56 | Mn | O3A A:Uga684 | 4.19 | Mn | O5D A:Uga684 | 4.74 | Mn | O2A A:Uga684 | 4.33 | Mn | O1B A:Uga684 | 2.59 | Mn | PB A:Uga684 | 3.95 | Mn | O1A A:Uga684 | 2.13 |
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Manganese binding site 3 out of 8 in 2z86
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 Click to enlarge |  Click to enlarge | Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 3 of Manganese in the PDB 2z86. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Manganese atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: B: Arg161, B: Asp239, B: Asp241, B: His386, B: Udp1, B: Hoh798, B: Hoh820, |
conact list:
Atom | Atom | Distance (A) | Mn | NH2 B:Arg161 | 3.74 | Mn | OD2 B:Asp239 | 4.95 | Mn | CB B:Asp241 | 4.25 | Mn | OD2 B:Asp241 | 2.25 | Mn | OD1 B:Asp241 | 3.03 | Mn | CG B:Asp241 | 2.91 | Mn | NE2 B:His386 | 2.17 | Mn | ND1 B:His386 | 4.10 | Mn | CD2 B:His386 | 3.20 | Mn | CE1 B:His386 | 2.98 | Mn | CG B:His386 | 4.24 | Mn | O3B B:Udp1 | 4.37 | Mn | PA B:Udp1 | 3.32 | Mn | O2A B:Udp1 | 2.04 | Mn | O1B B:Udp1 | 2.18 | Mn | PB B:Udp1 | 3.46 | Mn | C5' B:Udp1 | 4.76 | Mn | O5' B:Udp1 | 4.47 | Mn | O2B B:Udp1 | 4.50 | Mn | O3A B:Udp1 | 3.61 | Mn | O1A B:Udp1 | 4.24 | Mn | O B:Hoh798 | 4.82 | Mn | O B:Hoh820 | 2.07 |
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Manganese binding site 4 out of 8 in 2z86
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 Click to enlarge |  Click to enlarge | Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 4 of Manganese in the PDB 2z86. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Manganese atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: B: Asp521, B: Asp522, B: Arg628, B: Val629, B: His631, B: Uga683, B: Hoh821, B: Hoh822, |
conact list:
Atom | Atom | Distance (A) | Mn | CB B:Asp521 | 4.35 | Mn | OD2 B:Asp521 | 2.33 | Mn | OD1 B:Asp521 | 2.93 | Mn | CG B:Asp521 | 2.93 | Mn | OD2 B:Asp522 | 4.69 | Mn | OD1 B:Asp522 | 4.42 | Mn | CG B:Asp522 | 4.94 | Mn | NE B:Arg628 | 4.64 | Mn | O B:Val629 | 4.11 | Mn | NE2 B:His631 | 2.86 | Mn | ND1 B:His631 | 4.84 | Mn | CD2 B:His631 | 3.52 | Mn | CE1 B:His631 | 3.88 | Mn | CG B:His631 | 4.70 | Mn | O3B B:Uga683 | 4.25 | Mn | C5D B:Uga683 | 4.70 | Mn | PA B:Uga683 | 3.47 | Mn | C3D B:Uga683 | 4.93 | Mn | O2B B:Uga683 | 4.74 | Mn | O3A B:Uga683 | 3.89 | Mn | O5D B:Uga683 | 4.52 | Mn | O2A B:Uga683 | 4.52 | Mn | O1B B:Uga683 | 2.20 | Mn | PB B:Uga683 | 3.51 | Mn | O2' B:Uga683 | 4.99 | Mn | O1A B:Uga683 | 2.11 | Mn | O B:Hoh821 | 2.23 | Mn | O B:Hoh822 | 2.08 |
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Manganese binding site 5 out of 8 in 2z86
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 Click to enlarge |  Click to enlarge | Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 5 of Manganese in the PDB 2z86. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Manganese atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: C: Arg161, C: Asp241, C: His386, C: Udp1, C: Hoh819, C: Hoh853, |
conact list:
Atom | Atom | Distance (A) | Mn | CZ C:Arg161 | 4.85 | Mn | NH2 C:Arg161 | 4.74 | Mn | NH1 C:Arg161 | 4.19 | Mn | CB C:Asp241 | 4.58 | Mn | OD2 C:Asp241 | 2.34 | Mn | OD1 C:Asp241 | 3.59 | Mn | CG C:Asp241 | 3.28 | Mn | NE2 C:His386 | 2.47 | Mn | ND1 C:His386 | 4.31 | Mn | CD2 C:His386 | 3.25 | Mn | CE1 C:His386 | 3.34 | Mn | CG C:His386 | 4.30 | Mn | O3B C:Udp1 | 4.46 | Mn | PA C:Udp1 | 3.58 | Mn | O2A C:Udp1 | 2.37 | Mn | O1B C:Udp1 | 1.90 | Mn | PB C:Udp1 | 3.32 | Mn | O5' C:Udp1 | 4.80 | Mn | O2B C:Udp1 | 4.01 | Mn | O3A C:Udp1 | 3.85 | Mn | O1A C:Udp1 | 4.44 | Mn | O C:Hoh819 | 4.02 | Mn | O C:Hoh853 | 2.51 |
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Manganese binding site 6 out of 8 in 2z86
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 Click to enlarge |  Click to enlarge | Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 6 of Manganese in the PDB 2z86. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Manganese atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: C: Asp519, C: Asp521, C: Asp522, C: Arg628, C: Val629, C: His631, C: Uga683, C: Hoh795, |
conact list:
Atom | Atom | Distance (A) | Mn | CB C:Asp519 | 4.71 | Mn | OD2 C:Asp519 | 4.92 | Mn | CB C:Asp521 | 4.59 | Mn | OD2 C:Asp521 | 2.54 | Mn | OD1 C:Asp521 | 2.98 | Mn | CG C:Asp521 | 3.11 | Mn | OD2 C:Asp522 | 4.45 | Mn | OD1 C:Asp522 | 3.98 | Mn | CG C:Asp522 | 4.63 | Mn | CD C:Arg628 | 4.73 | Mn | CG C:Arg628 | 4.84 | Mn | O C:Val629 | 4.48 | Mn | NE2 C:His631 | 2.82 | Mn | ND1 C:His631 | 4.14 | Mn | CD2 C:His631 | 4.03 | Mn | CE1 C:His631 | 2.95 | Mn | CG C:His631 | 4.70 | Mn | O3B C:Uga683 | 4.19 | Mn | C5D C:Uga683 | 4.58 | Mn | PA C:Uga683 | 3.66 | Mn | C3D C:Uga683 | 4.94 | Mn | O2B C:Uga683 | 4.82 | Mn | O3A C:Uga683 | 4.09 | Mn | O5D C:Uga683 | 4.60 | Mn | O2A C:Uga683 | 4.72 | Mn | O1B C:Uga683 | 2.18 | Mn | PB C:Uga683 | 3.59 | Mn | O2' C:Uga683 | 4.71 | Mn | O1A C:Uga683 | 2.23 | Mn | O C:Hoh795 | 2.53 |
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Manganese binding site 7 out of 8 in 2z86
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 Click to enlarge |  Click to enlarge | Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 7 of Manganese in the PDB 2z86. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Manganese atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: D: Arg161, D: Asp239, D: Asp241, D: His386, D: Uga683, D: Hoh796, D: Hoh807, |
conact list:
Atom | Atom | Distance (A) | Mn | NH2 D:Arg161 | 4.31 | Mn | NH1 D:Arg161 | 4.82 | Mn | OD2 D:Asp239 | 4.40 | Mn | CB D:Asp241 | 4.77 | Mn | OD2 D:Asp241 | 2.52 | Mn | OD1 D:Asp241 | 3.39 | Mn | CG D:Asp241 | 3.33 | Mn | NE2 D:His386 | 2.67 | Mn | ND1 D:His386 | 3.88 | Mn | CD2 D:His386 | 3.93 | Mn | CE1 D:His386 | 2.66 | Mn | CG D:His386 | 4.53 | Mn | O3B D:Uga683 | 4.32 | Mn | C5D D:Uga683 | 4.81 | Mn | PA D:Uga683 | 3.36 | Mn | O5' D:Uga683 | 4.99 | Mn | O2B D:Uga683 | 4.69 | Mn | O3A D:Uga683 | 3.78 | Mn | O5D D:Uga683 | 4.57 | Mn | O2A D:Uga683 | 4.25 | Mn | O1B D:Uga683 | 2.12 | Mn | C1' D:Uga683 | 4.43 | Mn | PB D:Uga683 | 3.46 | Mn | O1A D:Uga683 | 2.15 | Mn | O D:Hoh796 | 4.87 | Mn | O D:Hoh807 | 2.20 |
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Manganese binding site 8 out of 8 in 2z86
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 Click to enlarge |  Click to enlarge | Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 8 of Manganese in the PDB 2z86. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Manganese atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: D: Asp519, D: Asp521, D: Asp522, D: Arg628, D: Val629, D: His631, D: Uga684, D: Hoh756, |
conact list:
Atom | Atom | Distance (A) | Mn | CB D:Asp519 | 4.70 | Mn | OD2 D:Asp519 | 4.66 | Mn | CB D:Asp521 | 4.34 | Mn | OD2 D:Asp521 | 2.38 | Mn | OD1 D:Asp521 | 2.75 | Mn | CG D:Asp521 | 2.88 | Mn | OD2 D:Asp522 | 4.17 | Mn | OD1 D:Asp522 | 4.25 | Mn | CG D:Asp522 | 4.57 | Mn | CD D:Arg628 | 4.62 | Mn | NE D:Arg628 | 4.19 | Mn | O D:Val629 | 4.23 | Mn | NE2 D:His631 | 3.80 | Mn | ND1 D:His631 | 4.55 | Mn | CE1 D:His631 | 3.35 | Mn | O3B D:Uga684 | 4.37 | Mn | C5D D:Uga684 | 4.50 | Mn | PA D:Uga684 | 3.62 | Mn | C3D D:Uga684 | 4.76 | Mn | O2B D:Uga684 | 4.81 | Mn | O3A D:Uga684 | 4.06 | Mn | O5D D:Uga684 | 4.53 | Mn | O2A D:Uga684 | 4.77 | Mn | O1B D:Uga684 | 2.28 | Mn | PB D:Uga684 | 3.66 | Mn | O1A D:Uga684 | 2.23 | Mn | O D:Hoh756 | 4.19 |
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