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Manganese in PDB 2y7a: Crystal Structure of Unliganded Gtb P156L

Enzymatic activity of Crystal Structure of Unliganded Gtb P156L

All present enzymatic activity of Crystal Structure of Unliganded Gtb P156L:
2.4.1.37;

Protein crystallography data

The structure of Crystal Structure of Unliganded Gtb P156L, PDB code: 2y7a was solved by J.Weadge, M.M.Palcic, A.Henriksen, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 143.76 / 2.06
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 63.730, 78.290, 143.740, 90.00, 88.96, 90.00
R / Rfree (%) 21.6 / 24.5

Manganese Binding Sites:

The binding sites of Manganese atom in the Crystal Structure of Unliganded Gtb P156L (pdb code 2y7a). This binding sites where shown within 5.0 Angstroms radius around Manganese atom.
In total only one binding site of Manganese was determined in the Crystal Structure of Unliganded Gtb P156L, PDB code: 2y7a:

Manganese binding site 1 out of 1 in 2y7a

Go back to Manganese Binding Sites List in 2y7a
Manganese binding site 1 out of 1 in the Crystal Structure of Unliganded Gtb P156L


Mono view


Stereo pair view

A full contact list of Manganese with other atoms in the Mn binding site number 1 of Crystal Structure of Unliganded Gtb P156L within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mn1346

b:45.0
occ:1.00
O A:HOH2135 2.1 9.6 1.0
OD2 A:ASP211 2.2 31.1 1.0
O1A A:UDP1347 2.4 39.0 1.0
OD1 A:ASP213 2.6 34.5 1.0
OD2 A:ASP213 3.0 35.9 1.0
CG A:ASP211 3.1 28.9 1.0
O2B A:UDP1347 3.2 41.0 1.0
CG A:ASP213 3.2 34.8 1.0
O3B A:UDP1347 3.3 41.0 1.0
CB A:ASP211 3.5 27.8 1.0
PB A:UDP1347 3.6 40.7 1.0
PA A:UDP1347 3.7 38.4 1.0
O3' A:UDP1347 3.7 30.2 1.0
O3A A:UDP1347 3.9 39.3 1.0
OD1 A:ASP211 4.2 29.3 1.0
C5' A:UDP1347 4.4 33.9 1.0
C3' A:UDP1347 4.5 30.6 1.0
O5' A:UDP1347 4.5 36.9 1.0
CB A:ASP213 4.7 35.1 1.0
O2A A:UDP1347 4.7 39.4 1.0
CA A:ASP211 4.9 26.9 1.0
C4' A:UDP1347 4.9 32.0 1.0

Reference:

J.Weadge, M.M.Palcic, A.Henriksen. Structural and Biochemical Characterization of the Human Blood Group A and B Galactosyltransferases Possessing the PRO156LEU Mutation To Be Published.
Page generated: Sat Oct 5 15:30:37 2024

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