Manganese in the structure of Tailspike Protein of Bacteriophage SF6 (pdb 2vbe)

The binding sites of Manganese atom in the structure of Tailspike Protein of Bacteriophage SF6 (pdb code 2vbe). This binding sites where shown with 5.0 Angstroms radius around Manganese atom. The 2vbe structure was solved by S.BARBIRZ, J.J.MUELLER, A.FREIBERG, U.HEINEMANN, R.SECKLER, with X-Ray Crystallography technique, brief refinement statistics is given in the table below: Resolution (A) 19.5-2.0 Space group H3 a (A) 95.910 b (A) 95.910 c (A) 182.600 alpha (°) 90.00 beta (°) 90.00 gamma (°) 120.00 Rfactor (%) 11.7 Rfree (%) 14.9 Manganese Binding Sites: Manganese binding site 1 out of 1 in 2vbe Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 1 of Manganese in the PDB 2vbe. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Manganese atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: A: Gln123, A: Asn131, A: Lys133, A: Asp135, A: Ala136, A: His153, A: Hoh2029, A: Hoh2614, A: Hoh2615, A: Hoh2616, A: Hoh2617, conact list: Atom Atom Distance (A) Mn NE2 A:Gln123 4.03 Mn O A:Asn131 4.54 Mn ND2 A:Asn131 4.71 Mn CG A:Asn131 4.96 Mn O A:Lys133 4.48 Mn N A:Asp135 4.49 Mn CB A:Asp135 4.55 Mn OD2 A:Asp135 3.44 Mn C A:Asp135 4.95 Mn OD1 A:Asp135 2.13 Mn CG A:Asp135 3.18 Mn CA A:Asp135 4.87 Mn N A:Ala136 4.43 Mn CB A:Ala136 4.95 Mn NE2 A:His153 4.26 Mn CB A:His153 3.71 Mn ND1 A:His153 2.23 Mn CD2 A:His153 4.39 Mn CE1 A:His153 3.08 Mn CG A:His153 3.32 Mn CA A:His153 4.29 Mn O A:Hoh2029 4.21 Mn O A:Hoh2614 2.23 Mn O A:Hoh2615 2.10 Mn O A:Hoh2616 2.12 Mn O A:Hoh2617 2.24 interactive model: