Manganese in PDB 2p73: Crystal Structure of A Glycosyltransferase Involved in the Glycosylation of the Major Capsid of Pbcv-1

The structure of Crystal Structure of A Glycosyltransferase Involved in the Glycosylation of the Major Capsid of Pbcv-1, PDB code: 2p73 was solved by Y.Zhang, Y.Xiang, J.L.Van Etten, M.G.Rossmann, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	10.00 / 2.30
Space group	P 1 21 1
Cell size a, b, c (Å), α, β, γ (°)	43.375, 63.535, 44.760, 90.00, 114.03, 90.00
R / Rfree (%)	19 / 24.3

The binding sites of Manganese atom in the Crystal Structure of A Glycosyltransferase Involved in the Glycosylation of the Major Capsid of Pbcv-1 (pdb code 2p73). This binding sites where shown within 5.0 Angstroms radius around Manganese atom.
In total only one binding site of Manganese was determined in the Crystal Structure of A Glycosyltransferase Involved in the Glycosylation of the Major Capsid of Pbcv-1, PDB code: 2p73:

Manganese binding site 1 out of 1 in the Crystal Structure of A Glycosyltransferase Involved in the Glycosylation of the Major Capsid of Pbcv-1


Mono view


Stereo pair view

A full contact list of Manganese with other atoms in the Mn binding site number 1 of Crystal Structure of A Glycosyltransferase Involved in the Glycosylation of the Major Capsid of Pbcv-1 within 5.0Å range: probe atom residue distance (Å) B Occ A:Mn214 b:2.0 occ:1.00 NE2 A:HIS193 2.1 29.8 1.0 O1A A:UDP411 2.3 37.9 1.0 OD1 A:ASP80 2.3 35.9 1.0 O1B A:UDP411 2.4 39.7 1.0 OD2 A:ASP78 2.4 34.5 1.0 OD2 A:ASP80 2.7 37.9 1.0 CG A:ASP80 2.8 34.4 1.0 CE1 A:HIS193 3.0 33.2 1.0 CD2 A:HIS193 3.1 34.2 1.0 CG A:ASP78 3.2 33.8 1.0 CB A:ASP78 3.3 32.0 1.0 PB A:UDP411 3.4 38.6 1.0 PA A:UDP411 3.5 37.0 1.0 O3A A:UDP411 3.7 37.5 1.0 O2B A:UDP411 3.9 39.0 1.0 ND1 A:HIS193 4.2 32.4 1.0 CG A:HIS193 4.3 33.8 1.0 OD1 A:ASP78 4.3 36.3 1.0 CB A:ASP80 4.3 33.5 1.0 O2A A:UDP411 4.5 37.8 1.0 C5' A:UDP411 4.5 40.0 1.0 O5' A:UDP411 4.5 37.6 1.0 CA A:CYS195 4.6 43.0 1.0 NH2 A:ARG202 4.6 42.8 1.0 O3B A:UDP411 4.7 39.5 1.0 O A:HOH441 4.8 43.5 1.0 CB A:CYS195 4.8 42.1 1.0 CA A:ASP78 4.8 32.5 1.0 O A:HOH436 4.8 46.4 1.0 N A:ASP80 4.8 33.6 1.0

Y.Zhang, Y.Xiang, J.L.Van Etten, M.G.Rossmann. Structure and Function of A Chlorella Virus-Encoded Glycosyltransferase. Structure V. 15 1031 2007.
ISSN: ISSN 0969-2126
PubMed: 17850743
DOI: 10.1016/J.STR.2007.07.006