Manganese in PDB 2p6w: Crystal Structure of A Glycosyltransferase Involved in the Glycosylation of the Major Capsid of Pbcv-1

The structure of Crystal Structure of A Glycosyltransferase Involved in the Glycosylation of the Major Capsid of Pbcv-1, PDB code: 2p6w was solved by Y.Zhang, X.Ye, J.L.Van Etten, M.G.Rossmann, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	8.00 / 1.60
Space group	P 1 21 1
Cell size a, b, c (Å), α, β, γ (°)	43.229, 63.017, 44.772, 90.00, 115.42, 90.00
R / Rfree (%)	17.2 / 19.5

The binding sites of Manganese atom in the Crystal Structure of A Glycosyltransferase Involved in the Glycosylation of the Major Capsid of Pbcv-1 (pdb code 2p6w). This binding sites where shown within 5.0 Angstroms radius around Manganese atom.
In total only one binding site of Manganese was determined in the Crystal Structure of A Glycosyltransferase Involved in the Glycosylation of the Major Capsid of Pbcv-1, PDB code: 2p6w:

Manganese binding site 1 out of 1 in the Crystal Structure of A Glycosyltransferase Involved in the Glycosylation of the Major Capsid of Pbcv-1


Mono view


Stereo pair view

A full contact list of Manganese with other atoms in the Mn binding site number 1 of Crystal Structure of A Glycosyltransferase Involved in the Glycosylation of the Major Capsid of Pbcv-1 within 5.0Å range: probe atom residue distance (Å) B Occ A:Mn214 b:22.1 occ:1.00 OD2 A:ASP80 2.1 26.0 1.0 OD2 A:ASP78 2.2 20.8 1.0 OA2 A:FLC802 2.2 25.8 1.0 NE2 A:HIS193 2.3 22.6 1.0 OB1 A:FLC802 2.4 26.6 1.0 OHB A:FLC802 2.4 26.5 1.0 CB A:FLC802 2.8 28.3 1.0 CG A:ASP80 3.0 23.6 1.0 CBC A:FLC802 3.1 28.3 1.0 OD1 A:ASP80 3.2 25.2 1.0 CG A:ASP78 3.2 22.0 1.0 CE1 A:HIS193 3.2 21.7 1.0 CAC A:FLC802 3.3 28.8 1.0 CD2 A:HIS193 3.3 21.9 1.0 CB A:ASP78 3.5 20.6 1.0 CA A:FLC802 3.6 27.9 1.0 O A:HOH916 4.1 30.7 1.0 CG A:FLC802 4.3 27.8 1.0 OG1 A:FLC802 4.3 26.3 1.0 OD1 A:ASP78 4.3 21.6 1.0 OB2 A:FLC802 4.3 27.3 1.0 CB A:ASP80 4.4 20.9 1.0 ND1 A:HIS193 4.4 20.4 1.0 OA1 A:FLC802 4.4 27.0 1.0 CG A:HIS193 4.4 21.7 1.0 CA A:CYS195 4.5 22.5 1.0 NH2 A:ARG202 4.6 23.2 1.0 SG A:CYS195 4.6 24.2 1.0 CB A:CYS195 4.7 21.5 1.0 CA A:GLY121 4.8 20.2 1.0 CGC A:FLC802 4.8 30.3 1.0

Y.Zhang, Y.Xiang, J.L.Van Etten, M.G.Rossmann. Structure and Function of A Chlorella Virus-Encoded Glycosyltransferase. Structure V. 15 1031 2007.
ISSN: ISSN 0969-2126
PubMed: 17850743
DOI: 10.1016/J.STR.2007.07.006