Atomistry » Manganese » PDB 2hvh-2jcj » 2hyp
Atomistry »
  Manganese »
    PDB 2hvh-2jcj »
      2hyp »

Manganese in PDB 2hyp: Crystal Structure of RV0805 D66A Mutant

Enzymatic activity of Crystal Structure of RV0805 D66A Mutant

All present enzymatic activity of Crystal Structure of RV0805 D66A Mutant:
3.1.4.17;

Protein crystallography data

The structure of Crystal Structure of RV0805 D66A Mutant, PDB code: 2hyp was solved by A.R.Shenoy, M.Capuder, P.Draskovic, D.Lamba, S.S.Visweswariah, M.Podobnik, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 50.00 / 2.05
Space group P 21 21 2
Cell size a, b, c (Å), α, β, γ (°) 55.297, 93.709, 50.924, 90.00, 90.00, 90.00
R / Rfree (%) 20.8 / 25.7

Other elements in 2hyp:

The structure of Crystal Structure of RV0805 D66A Mutant also contains other interesting chemical elements:

Bromine (Br) 4 atoms
Arsenic (As) 1 atom
Iron (Fe) 1 atom

Manganese Binding Sites:

The binding sites of Manganese atom in the Crystal Structure of RV0805 D66A Mutant (pdb code 2hyp). This binding sites where shown within 5.0 Angstroms radius around Manganese atom.
In total only one binding site of Manganese was determined in the Crystal Structure of RV0805 D66A Mutant, PDB code: 2hyp:

Manganese binding site 1 out of 1 in 2hyp

Go back to Manganese Binding Sites List in 2hyp
Manganese binding site 1 out of 1 in the Crystal Structure of RV0805 D66A Mutant


Mono view


Stereo pair view

A full contact list of Manganese with other atoms in the Mn binding site number 1 of Crystal Structure of RV0805 D66A Mutant within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mn555

b:40.7
occ:1.00
O A:HOH608 2.1 55.7 1.0
NE2 A:HIS169 2.1 55.0 1.0
OD1 A:ASN97 2.1 52.9 1.0
OD2 A:ASP63 2.1 58.0 1.0
ND1 A:HIS207 2.2 57.8 1.0
O2 A:CAC400 2.2 58.5 0.8
CE1 A:HIS169 2.9 55.0 1.0
CE1 A:HIS207 3.0 56.9 1.0
CG A:ASP63 3.1 57.1 1.0
CG A:ASN97 3.2 54.0 1.0
CD2 A:HIS169 3.2 54.7 1.0
CG A:HIS207 3.3 57.9 1.0
OD1 A:ASP63 3.4 57.2 1.0
AS A:CAC400 3.6 59.4 0.8
ND2 A:ASN97 3.6 52.9 1.0
FE A:FE444 3.6 39.5 0.5
CA A:HIS207 3.7 58.6 1.0
CB A:HIS207 3.8 58.2 1.0
OD1 A:ASP21 3.9 58.8 1.0
O1 A:CAC400 4.1 59.3 0.8
ND1 A:HIS169 4.1 54.7 1.0
NE2 A:HIS207 4.2 57.1 1.0
O A:HIS207 4.2 59.0 1.0
C1 A:CAC400 4.3 58.8 0.8
CG A:HIS169 4.3 55.1 1.0
CB A:ASP63 4.4 56.7 1.0
CD2 A:HIS207 4.4 57.4 1.0
C A:HIS207 4.5 58.9 1.0
CB A:ASN97 4.5 54.8 1.0
N A:ASN97 4.5 55.3 1.0
CD2 A:HIS98 4.5 57.5 1.0
N A:HIS207 4.6 58.3 1.0

Reference:

A.R.Shenoy, M.Capuder, P.Draskovic, D.Lamba, S.S.Visweswariah, M.Podobnik. Structural and Biochemical Analysis of the RV0805 Cyclic Nucleotide Phosphodiesterase From Mycobacterium Tuberculosis. J.Mol.Biol. V. 365 211 2007.
ISSN: ISSN 0022-2836
PubMed: 17059828
DOI: 10.1016/J.JMB.2006.10.005
Page generated: Sat Oct 5 14:25:38 2024

Last articles

Zn in 9JYW
Zn in 9IR4
Zn in 9IR3
Zn in 9GMX
Zn in 9GMW
Zn in 9JEJ
Zn in 9ERF
Zn in 9ERE
Zn in 9EGV
Zn in 9EGW
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy