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Manganese in PDB 2g38: A Pe/Ppe Protein Complex From Mycobacterium Tuberculosis

Protein crystallography data

The structure of A Pe/Ppe Protein Complex From Mycobacterium Tuberculosis, PDB code: 2g38 was solved by M.Strong, M.R.Sawaya, D.Eisenberg, Tb Structural Genomics Consortium(Tbsgc), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 19.84 / 2.20
Space group P 2 2 21
Cell size a, b, c (Å), α, β, γ (°) 40.862, 46.758, 283.125, 90.00, 90.00, 90.00
R / Rfree (%) 24.7 / 31.2

Manganese Binding Sites:

The binding sites of Manganese atom in the A Pe/Ppe Protein Complex From Mycobacterium Tuberculosis (pdb code 2g38). This binding sites where shown within 5.0 Angstroms radius around Manganese atom.
In total 2 binding sites of Manganese where determined in the A Pe/Ppe Protein Complex From Mycobacterium Tuberculosis, PDB code: 2g38:
Jump to Manganese binding site number: 1; 2;

Manganese binding site 1 out of 2 in 2g38

Go back to Manganese Binding Sites List in 2g38
Manganese binding site 1 out of 2 in the A Pe/Ppe Protein Complex From Mycobacterium Tuberculosis


Mono view


Stereo pair view

A full contact list of Manganese with other atoms in the Mn binding site number 1 of A Pe/Ppe Protein Complex From Mycobacterium Tuberculosis within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Mn199

b:5.8
occ:0.50
OD2 B:ASP152 2.0 3.9 1.0
OE2 B:GLU148 2.6 6.8 1.0
CG B:ASP152 2.7 4.3 1.0
OD1 B:ASP152 2.8 4.7 1.0
CG B:GLU148 3.3 6.1 1.0
CD B:GLU148 3.3 6.0 1.0
NH1 B:ARG151 3.8 11.9 1.0
CB B:ASP152 4.2 2.8 1.0
O B:HOH211 4.3 13.0 1.0
O B:GLU148 4.4 4.2 1.0
OE1 B:GLU148 4.5 15.2 1.0
CB B:GLU148 4.7 6.0 1.0
C B:GLU148 5.0 2.9 1.0

Manganese binding site 2 out of 2 in 2g38

Go back to Manganese Binding Sites List in 2g38
Manganese binding site 2 out of 2 in the A Pe/Ppe Protein Complex From Mycobacterium Tuberculosis


Mono view


Stereo pair view

A full contact list of Manganese with other atoms in the Mn binding site number 2 of A Pe/Ppe Protein Complex From Mycobacterium Tuberculosis within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Mn199

b:16.1
occ:0.50
OD2 D:ASP152 2.2 16.8 1.0
OE2 D:GLU148 2.3 17.8 1.0
CG D:ASP152 3.0 18.0 1.0
OD1 D:ASP152 3.0 17.1 1.0
CD D:GLU148 3.2 18.6 1.0
CG D:GLU148 3.2 18.8 1.0
NH1 D:ARG151 3.7 20.4 1.0
OE1 D:GLU148 4.4 21.3 1.0
O D:GLU148 4.4 7.9 1.0
CB D:ASP152 4.4 17.7 1.0
CB D:GLU148 4.7 16.8 1.0
CZ D:ARG151 5.0 19.7 1.0

Reference:

M.Strong, M.R.Sawaya, S.Wang, M.Phillips, D.Cascio, D.Eisenberg. Toward the Structural Genomics of Complexes: Crystal Structure of A Pe/Ppe Protein Complex From Mycobacterium Tuberculosis. Proc.Natl.Acad.Sci.Usa V. 103 8060 2006.
ISSN: ISSN 0027-8424
PubMed: 16690741
DOI: 10.1073/PNAS.0602606103
Page generated: Sat Oct 5 14:08:50 2024

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