Manganese in the structure of Crystal Structure of Human Ppgalnact-2 Complexed With Udp and EA2 (pdb 2ffu)

The binding sites of Manganese atom in the structure of Crystal Structure of Human Ppgalnact-2 Complexed With Udp and EA2 (pdb code 2ffu). This binding sites where shown with 5.0 Angstroms radius around Manganese atom. The 2ffu structure was solved by T.A.FRITZ, with X-Ray Crystallography technique, brief refinement statistics is given in the table below: Resolution (A) 24.5-1.6 Space group P61 a (A) 69.344 b (A) 69.344 c (A) 169.124 alpha (°) 90.00 beta (°) 90.00 gamma (°) 120.00 Rfactor (%) 17.8 Rfree (%) 20.6 Manganese Binding Sites: Manganese binding site 1 out of 1 in 2ffu Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 1 of Manganese in the PDB 2ffu. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Manganese atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: A: Asp224, A: His226, A: His359, A: Val360, A: Arg362, A: Udp601, A: Hoh733, A: Hoh779, A: Hoh1054, conact list: Atom Atom Distance (A) Mn CB A:Asp224 3.79 Mn OD2 A:Asp224 2.19 Mn OD1 A:Asp224 4.34 Mn CG A:Asp224 3.29 Mn NE2 A:His226 2.23 Mn ND1 A:His226 4.30 Mn CD2 A:His226 3.25 Mn CE1 A:His226 3.16 Mn CG A:His226 4.37 Mn NE2 A:His359 2.22 Mn ND1 A:His359 4.25 Mn CD2 A:His359 3.31 Mn CE1 A:His359 3.08 Mn CG A:His359 4.39 Mn O A:Val360 4.43 Mn NH2 A:Arg362 4.77 Mn O3B A:Udp601 3.87 Mn C3' A:Udp601 4.93 Mn PA A:Udp601 3.41 Mn O2A A:Udp601 4.60 Mn O1B A:Udp601 2.10 Mn PB A:Udp601 3.25 Mn C5' A:Udp601 4.06 Mn C4' A:Udp601 4.92 Mn O5' A:Udp601 4.28 Mn O2B A:Udp601 4.61 Mn O3A A:Udp601 3.59 Mn O1A A:Udp601 2.21 Mn O A:Hoh733 4.78 Mn O A:Hoh779 3.77 Mn O A:Hoh1054 2.45 interactive model: