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Manganese in PDB 2fe1: Crystal Structure of PAE0151 From Pyrobaculum Aerophilum

Protein crystallography data

The structure of Crystal Structure of PAE0151 From Pyrobaculum Aerophilum, PDB code: 2fe1 was solved by R.D.Bunker, E.N.Baker, V.L.Arcus, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 52.63 / 2.20
Space group P 61 2 2
Cell size a, b, c (Å), α, β, γ (°) 72.343, 72.343, 96.803, 90.00, 90.00, 120.00
R / Rfree (%) 17.4 / 22.9

Other elements in 2fe1:

The structure of Crystal Structure of PAE0151 From Pyrobaculum Aerophilum also contains other interesting chemical elements:

Chlorine (Cl) 1 atom
Calcium (Ca) 1 atom

Manganese Binding Sites:

The binding sites of Manganese atom in the Crystal Structure of PAE0151 From Pyrobaculum Aerophilum (pdb code 2fe1). This binding sites where shown within 5.0 Angstroms radius around Manganese atom.
In total only one binding site of Manganese was determined in the Crystal Structure of PAE0151 From Pyrobaculum Aerophilum, PDB code: 2fe1:

Manganese binding site 1 out of 1 in 2fe1

Go back to Manganese Binding Sites List in 2fe1
Manganese binding site 1 out of 1 in the Crystal Structure of PAE0151 From Pyrobaculum Aerophilum


Mono view


Stereo pair view

A full contact list of Manganese with other atoms in the Mn binding site number 1 of Crystal Structure of PAE0151 From Pyrobaculum Aerophilum within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mn132

b:40.8
occ:0.33
OD2 A:ASP118 2.2 41.2 1.0
O A:HOH323 2.4 35.3 1.0
O A:HOH370 2.5 45.0 1.0
O A:HOH377 3.0 49.2 1.0
CG A:ASP118 3.4 36.1 1.0
O A:HOH378 3.9 45.1 1.0
CB A:ASP118 4.2 33.8 1.0
O A:HOH334 4.4 43.9 1.0
OD1 A:ASP118 4.4 38.6 1.0
OD1 A:ASP100 4.6 17.2 1.0
OD2 A:ASP100 4.6 21.2 1.0

Reference:

R.D.Bunker, J.L.Mckenzie, E.N.Baker, V.L.Arcus. Crystal Structure of PAE0151 From Pyrobaculum Aerophilum, A Pin-Domain (Vapc) Protein From A Toxin-Antitoxin Operon. Proteins V. 72 510 2008.
ISSN: ISSN 0887-3585
PubMed: 18398909
DOI: 10.1002/PROT.22048
Page generated: Tue Dec 15 04:01:40 2020

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