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Manganese in PDB 2cna: The Covalent and Three-Dimensional Structure of Concanavalin A, IV.Atomic Coordinates,Hydrogen Bonding,and Quaternary Structure

Protein crystallography data

The structure of The Covalent and Three-Dimensional Structure of Concanavalin A, IV.Atomic Coordinates,Hydrogen Bonding,and Quaternary Structure, PDB code: 2cna was solved by G.N.Reekejunior, J.W.Becker, G.M.Edelman, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) N/A / 2.00
Space group I 2 2 2
Cell size a, b, c (Å), α, β, γ (°) 89.910, 87.230, 63.070, 90.00, 90.00, 90.00
R / Rfree (%) n/a / n/a

Other elements in 2cna:

The structure of The Covalent and Three-Dimensional Structure of Concanavalin A, IV.Atomic Coordinates,Hydrogen Bonding,and Quaternary Structure also contains other interesting chemical elements:

Calcium (Ca) 1 atom

Manganese Binding Sites:

The binding sites of Manganese atom in the The Covalent and Three-Dimensional Structure of Concanavalin A, IV.Atomic Coordinates,Hydrogen Bonding,and Quaternary Structure (pdb code 2cna). This binding sites where shown within 5.0 Angstroms radius around Manganese atom.
In total only one binding site of Manganese was determined in the The Covalent and Three-Dimensional Structure of Concanavalin A, IV.Atomic Coordinates,Hydrogen Bonding,and Quaternary Structure, PDB code: 2cna:

Manganese binding site 1 out of 1 in 2cna

Go back to Manganese Binding Sites List in 2cna
Manganese binding site 1 out of 1 in the The Covalent and Three-Dimensional Structure of Concanavalin A, IV.Atomic Coordinates,Hydrogen Bonding,and Quaternary Structure


Mono view


Stereo pair view

A full contact list of Manganese with other atoms in the Mn binding site number 1 of The Covalent and Three-Dimensional Structure of Concanavalin A, IV.Atomic Coordinates,Hydrogen Bonding,and Quaternary Structure within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mn238

b:0.0
occ:1.00
NE2 A:HIS24 2.4 0.0 1.0
O A:HOH240 2.5 0.0 1.0
O A:HOH241 2.6 0.0 1.0
OD2 A:ASP19 2.7 0.0 1.0
OE2 A:GLU8 2.9 0.0 1.0
OD2 A:ASP10 2.9 0.0 1.0
CG A:ASP19 3.3 0.0 1.0
CD2 A:HIS24 3.3 0.0 1.0
CE1 A:HIS24 3.5 0.0 1.0
CD A:GLU8 3.6 0.0 1.0
OE1 A:GLU8 3.6 0.0 1.0
CB A:ASP19 3.7 0.0 1.0
CG A:ASP10 3.7 0.0 1.0
OG A:SER34 3.8 0.0 1.0
CB A:ASP10 3.9 0.0 1.0
OD1 A:ASP19 4.0 0.0 1.0
O A:HOH242 4.1 0.0 1.0
CG A:HIS24 4.5 0.0 1.0
CA A:ASP19 4.5 0.0 1.0
ND1 A:HIS24 4.5 0.0 1.0
CA A:CA239 4.6 0.0 1.0
OD1 A:ASP10 4.7 0.0 1.0
O A:VAL32 5.0 0.0 1.0

Reference:

G.N.Reeke Jr., J.W.Becker, G.M.Edelman. The Covalent and Three-Dimensional Structure of Concanavalin A. IV. Atomic Coordinates, Hydrogen Bonding, and Quaternary Structure. J.Biol.Chem. V. 250 1525 1975.
ISSN: ISSN 0021-9258
PubMed: 1112816
Page generated: Tue Dec 15 04:00:35 2020

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