Manganese in the structure of Structural Basis For Utp Specificity of Rna Editing Tutases From Trypanosoma Brucei (pdb 2b51)

The binding sites of Manganese atom in the structure of Structural Basis For Utp Specificity of Rna Editing Tutases From Trypanosoma Brucei (pdb code 2b51). This binding sites where shown with 5.0 Angstroms radius around Manganese atom. The 2b51 structure was solved by J.DENG, N.L.ERNST, S.TURLEY, K.D.STUART, W.G.HOL, with X-Ray Crystallography technique, brief refinement statistics is given in the table below: Resolution (A) 50.0-2.0 Space group P41212 a (A) 91.006 b (A) 91.006 c (A) 162.173 alpha (°) 90.00 beta (°) 90.00 gamma (°) 90.00 Rfactor (%) 18.7 Rfree (%) 22.7 Manganese Binding Sites: Manganese binding site 1 out of 1 in 2b51 Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 1 of Manganese in the PDB 2b51. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Manganese atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: A: Gly84, A: Ser85, A: Asp97, A: Asp99, A: Utp501, A: Hoh505, A: Hoh525, A: Hoh542, A: Hoh828, conact list: Atom Atom Distance (A) Mn CA A:Gly84 4.70 Mn N A:Ser85 4.39 Mn CB A:Ser85 4.88 Mn OG A:Ser85 4.40 Mn O A:Asp97 4.00 Mn N A:Asp97 4.46 Mn CB A:Asp97 4.61 Mn OD2 A:Asp97 3.81 Mn C A:Asp97 4.44 Mn OD1 A:Asp97 2.13 Mn CG A:Asp97 3.31 Mn CA A:Asp97 4.77 Mn N A:Asp99 4.98 Mn CB A:Asp99 4.38 Mn OD2 A:Asp99 2.04 Mn OD1 A:Asp99 3.28 Mn CG A:Asp99 3.00 Mn PG A:Utp501 3.39 Mn O3B A:Utp501 3.65 Mn O2G A:Utp501 4.28 Mn PA A:Utp501 3.40 Mn O3G A:Utp501 2.11 Mn O2A A:Utp501 4.62 Mn O1B A:Utp501 2.13 Mn PB A:Utp501 3.23 Mn C5' A:Utp501 3.92 Mn O5' A:Utp501 4.21 Mn O2B A:Utp501 4.62 Mn O3A A:Utp501 3.61 Mn O1G A:Utp501 4.41 Mn O1A A:Utp501 2.20 Mn O A:Hoh505 4.43 Mn O A:Hoh525 2.29 Mn O A:Hoh542 3.98 Mn O A:Hoh828 4.06 interactive model: