Chemical elements
  Manganese
    Isotopes
    Energy
    Production
    Application
    Chemical properties
    Physical properties
    PDB 117e-1cs0
    PDB 1cvn-1fbg
    PDB 1fe1-1gz9
    PDB 1gzc-1j53
    PDB 1j54-1kx3
    PDB 1kx4-1mav
    PDB 1mb0-1nvm
    PDB 1nxd-1pj2
    PDB 1pj3-1r8b
    PDB 1r8c-1tc2
    PDB 1tei-1vby
    PDB 1vew-1xid
    PDB 1xie-1za0
    PDB 1zao-2ah9
      1zao
      1zar
      1zco
      1zct
      1zdf
      1zdg
      1zdm
      1zi1
      1zip
      1zj2
      1zjo
      1zjp
      1zlz
      1zm8
      1zop
      1zp9
      1zpe
      1zpg
      1zql
      1zqm
      1zqq
      1zqz
      1zsp
      1zte
      1zth
      1zu0
      1zuq
      283d
      2a03
      2a2d
      2a2t
      2a7a
      2a8p
      2a8q
      2a8r
      2a8s
      2a8t
      2a8u
      2a8w
      2a9i
      2a9o
      2a9p
      2adp
      2adq
      2ae7
      2aeb
      2aec
      2aes
      2agd
      2ah9
    PDB 2akw-2brl
    PDB 2bvl-2dvb
    PDB 2dvd-2g38
    PDB 2g4i-2ify
    PDB 2iie-2mnr
    PDB 2muc-2p9a
    PDB 2pal-2r21
    PDB 2r22-2vqr
    PDB 2vs3-2z87
    PDB 2zad-3bso
    PDB 3bu0-3e7b
    PDB 3e8q-3g82
    PDB 3gbc-3ilm
    PDB 3ioi-3lp0
    PDB 3lp1-3n25
    PDB 3n37-3pvb
    PDB 3py5-3tmy
    PDB 3twz-4e5f
    PDB 4e5g-8icv
    PDB 8icw-9xim

Manganese in the structure of Contribution to Structure and Catalysis of Tyrosine 34 in Human Manganese Superoxide Dismutase (pdb 1zuq)






The binding sites of Manganese atom in the structure of Contribution to Structure and Catalysis of Tyrosine 34 in Human Manganese Superoxide Dismutase (pdb code 1zuq). This binding sites where shown with 5.0 Angstroms radius around Manganese atom.
The 1zuq structure was solved by A.S.HEARN, J.J.PERRY, D.E.CABELII, J.A.TAINER, H.S.NICK, D.S.SILVERMAN, with X-Ray Crystallography technique, brief refinement statistics is given in the table below:
Resolution (A)39.6-2.0
Space groupP6122
a (A)79.626
b (A)79.626
c (A)241.612
alpha (°)90.00
beta (°)90.00
gamma (°)120.00
Rfactor (%)23.5
Rfree (%)27.4


Manganese Binding Sites:

Manganese binding site 1 out of 2 in 1zuq


Manganese binding site 1 out of 2 in 1zuq
Click to enlarge
stereopicture of Manganese binding site 1 out of 2 in 1zuq
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 1 of Manganese in the PDB 1zuq. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Manganese atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: His26, A: His74, A: Trp123, A: Gln143, A: Asp159, A: Trp161, A: His163, A: Ala164, A: Hoh5011, A: Hoh5069,

conact list:


AtomAtomDistance (A)
MnNE2 A:His262.19
MnND1 A:His264.27
MnCD2 A:His263.19
MnCE1 A:His263.14
MnCG A:His264.32
MnNE2 A:His742.19
MnND1 A:His744.31
MnCD2 A:His743.09
MnCE1 A:His743.23
MnCG A:His744.28
MnCZ2 A:Trp1234.32
MnCH2 A:Trp1234.93
MnNE2 A:Gln1434.52
MnCB A:Asp1594.39
MnOD2 A:Asp1593.66
MnOD1 A:Asp1592.00
MnCG A:Asp1593.15
MnCB A:Trp1614.58
MnCD1 A:Trp1614.91
MnCG A:Trp1614.69
MnNE2 A:His1632.16
MnND1 A:His1634.22
MnCD2 A:His1633.12
MnCE1 A:His1633.12
MnCG A:His1634.26
MnCB A:Ala1645.00
MnO A:Hoh50112.11
MnO A:Hoh50694.76

interactive model:


Manganese binding site 2 out of 2 in 1zuq


Manganese binding site 2 out of 2 in 1zuq
Click to enlarge
stereopicture of Manganese binding site 2 out of 2 in 1zuq
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 2 of Manganese in the PDB 1zuq. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Manganese atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: B: His26, B: His74, B: Trp123, B: Asp159, B: Trp161, B: His163, B: Hoh5022, B: Hoh5056,

conact list:


AtomAtomDistance (A)
MnNE2 B:His262.21
MnND1 B:His264.27
MnCD2 B:His263.22
MnCE1 B:His263.14
MnCG B:His264.34
MnNE2 B:His742.21
MnND1 B:His744.27
MnCD2 B:His743.11
MnCE1 B:His743.20
MnCG B:His744.26
MnCZ2 B:Trp1234.16
MnCH2 B:Trp1234.62
MnCB B:Asp1594.34
MnOD2 B:Asp1593.67
MnOD1 B:Asp1592.00
MnCG B:Asp1593.14
MnCB B:Trp1614.95
MnNE2 B:His1632.16
MnND1 B:His1634.23
MnCD2 B:His1633.16
MnCE1 B:His1633.11
MnCG B:His1634.29
MnO B:Hoh50222.29
MnO B:Hoh50564.93

interactive model:




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