Manganese in the structure of Crystal Structure of Human Galactosyltransferase (Gtb) Complexed With H Type I Trisaccharide (pdb 1zj2)

The binding sites of Manganese atom in the structure of Crystal Structure of Human Galactosyltransferase (Gtb) Complexed With H Type I Trisaccharide (pdb code 1zj2). This binding sites where shown with 5.0 Angstroms radius around Manganese atom. The 1zj2 structure was solved by J.A.LETTS, N.L.ROSE, Y.R.FANG, C.H.BARRY, S.N.BORISOVA, N.O.SETO, M.M.PALCIC, S.V.EVANS, with X-Ray Crystallography technique, brief refinement statistics is given in the table below: Resolution (A) 20.0-1.7 Space group C2221 a (A) 52.600 b (A) 150.430 c (A) 79.610 alpha (°) 90.00 beta (°) 90.00 gamma (°) 90.00 Rfactor (%) 20.6 Rfree (%) 23.2 Manganese Binding Sites: Manganese binding site 1 out of 1 in 1zj2 Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 1 of Manganese in the PDB 1zj2. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Manganese atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: A: Asp211, A: Asp213, A: Met214, A: Udp1, A: Hoh579, A: Hoh615, conact list: Atom Atom Distance (A) Mn CB A:Asp211 3.56 Mn OD2 A:Asp211 2.37 Mn OD1 A:Asp211 4.42 Mn CG A:Asp211 3.30 Mn CA A:Asp211 4.97 Mn O A:Asp213 4.83 Mn CB A:Asp213 4.41 Mn OD2 A:Asp213 2.71 Mn OD1 A:Asp213 2.40 Mn CG A:Asp213 2.90 Mn SD A:Met214 4.99 Mn O3B A:Udp1 2.13 Mn C3' A:Udp1 4.50 Mn PA A:Udp1 3.43 Mn O2A A:Udp1 4.45 Mn O1B A:Udp1 4.11 Mn PB A:Udp1 3.26 Mn O3' A:Udp1 3.67 Mn C5' A:Udp1 4.14 Mn C4' A:Udp1 4.82 Mn O5' A:Udp1 4.32 Mn O2B A:Udp1 4.56 Mn O3A A:Udp1 3.58 Mn O1A A:Udp1 2.09 Mn O A:Hoh579 4.99 Mn O A:Hoh615 4.71 interactive model: