Manganese in PDB 1uon: Reovirus Polymerase Lambda-3 Localized By Electron Cryomicroscopy of Virions at 7.6-A Resolution

The binding sites of Manganese atom in the Reovirus Polymerase Lambda-3 Localized By Electron Cryomicroscopy of Virions at 7.6-A Resolution (pdb code 1uon). This binding sites where shown within 5.0 Angstroms radius around Manganese atom.
In total 2 binding sites of Manganese where determined in the Reovirus Polymerase Lambda-3 Localized By Electron Cryomicroscopy of Virions at 7.6-A Resolution, PDB code: 1uon:
Jump to Manganese binding site number: 1; 2;

Manganese binding site 1 out of 2 in the Reovirus Polymerase Lambda-3 Localized By Electron Cryomicroscopy of Virions at 7.6-A Resolution


Mono view


Stereo pair view

A full contact list of Manganese with other atoms in the Mn binding site number 1 of Reovirus Polymerase Lambda-3 Localized By Electron Cryomicroscopy of Virions at 7.6-A Resolution within 5.0Å range: probe atom residue distance (Å) B Occ A:Mn1304 b:63.1 occ:1.00 OD2 A:ASP734 2.2 49.1 1.0 O2B A:CH11301 2.3 0.3 1.0 O A:ILE586 2.5 42.7 1.0 OD1 A:ASP585 2.7 44.9 1.0 O1A A:CH11301 3.1 99.1 1.0 O1G A:CH11301 3.1 98.9 1.0 O3G A:CH11301 3.2 99.1 1.0 CG A:ASP734 3.3 45.9 1.0 MN A:MN1305 3.3 60.1 1.0 C A:ILE586 3.4 41.1 1.0 CG A:ASP585 3.5 46.3 1.0 PB A:CH11301 3.6 0.5 1.0 OD2 A:ASP585 3.7 45.3 1.0 OD1 A:ASP734 3.9 48.4 1.0 CA A:SER587 3.9 40.3 1.0 PG A:CH11301 3.9 99.2 1.0 O3B A:CH11301 4.0 99.9 1.0 N A:SER587 4.0 39.4 1.0 N A:ILE586 4.1 42.1 1.0 PA A:CH11301 4.3 99.7 1.0 O3A A:CH11301 4.3 99.9 1.0 CB A:ASP734 4.4 42.0 1.0 CA A:ILE586 4.4 41.2 1.0 N A:ALA588 4.7 40.6 1.0 C A:SER587 4.7 40.3 1.0 O1B A:CH11301 4.8 0.0 1.0 C5' A:CH11301 4.8 96.1 1.0 CB A:CYS589 4.9 37.2 1.0 CB A:ASP585 4.9 44.9 1.0 CB A:SER587 4.9 41.5 1.0 O5' A:CH11301 4.9 98.8 1.0 C A:ASP585 5.0 43.8 1.0 O A:ASP734 5.0 39.8 1.0

Manganese binding site 2 out of 2 in the Reovirus Polymerase Lambda-3 Localized By Electron Cryomicroscopy of Virions at 7.6-A Resolution


Mono view


Stereo pair view

A full contact list of Manganese with other atoms in the Mn binding site number 2 of Reovirus Polymerase Lambda-3 Localized By Electron Cryomicroscopy of Virions at 7.6-A Resolution within 5.0Å range: probe atom residue distance (Å) B Occ A:Mn1305 b:60.1 occ:1.00 OD1 A:ASP734 2.3 48.4 1.0 O1A A:CH11301 2.6 99.1 1.0 OD2 A:ASP585 2.7 45.3 1.0 OD1 A:ASP735 2.9 46.2 1.0 CG A:ASP734 3.0 45.9 1.0 OD2 A:ASP734 3.1 49.1 1.0 MN A:MN1304 3.3 63.1 1.0 CG A:ASP585 3.7 46.3 1.0 O5' A:CH11301 3.7 98.8 1.0 PA A:CH11301 3.7 99.7 1.0 OD1 A:ASP585 4.0 44.9 1.0 C5' A:CH11301 4.0 96.1 1.0 CG A:ASP735 4.0 43.5 1.0 C A:ASP734 4.2 39.8 1.0 O A:ASP734 4.2 39.8 1.0 CB A:ASP734 4.3 42.0 1.0 N A:ASP735 4.3 40.1 1.0 CB A:ASP735 4.4 41.1 1.0 O2B A:CH11301 4.6 0.3 1.0 CA A:ASP735 4.6 39.0 1.0 O2A A:CH11301 4.6 99.8 1.0 CA A:ASP734 4.7 40.0 1.0 N A:ASP734 4.9 38.6 1.0 O3' B:G1276 4.9 1.0 1.0 O3A A:CH11301 4.9 99.9 1.0 O3G A:CH11301 5.0 99.1 1.0

X.Zhang, S.B.Walker, P.R.Chipman, M.L.Nibert, T.S.Baker. Reovirus Polymerase LAMBDA3 Localized By Cryo-Electron Microscopy of Virions at A Resolution of 7.6 A Nat.Struct.Biol. V. 10 1011 2003.
ISSN: ISSN 1072-8368
PubMed: 14608373
DOI: 10.1038/NSB1009