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Manganese in PDB 1qps: The Crystal Structure of A Post-Reactive Cognate Dna-Eco Ri Complex at 2.50 A in the Presence of MN2+ Ion

Protein crystallography data

The structure of The Crystal Structure of A Post-Reactive Cognate Dna-Eco Ri Complex at 2.50 A in the Presence of MN2+ Ion, PDB code: 1qps was solved by M.Horvath, J.Choi, Y.Kim, P.Wilkosz, J.M.Rosenberg, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 8.00 / 2.50
Space group P 3 2 1
Cell size a, b, c (Å), α, β, γ (°) 118.400, 118.400, 49.700, 90.00, 90.00, 120.00
R / Rfree (%) n/a / n/a

Manganese Binding Sites:

The binding sites of Manganese atom in the The Crystal Structure of A Post-Reactive Cognate Dna-Eco Ri Complex at 2.50 A in the Presence of MN2+ Ion (pdb code 1qps). This binding sites where shown within 5.0 Angstroms radius around Manganese atom.
In total only one binding site of Manganese was determined in the The Crystal Structure of A Post-Reactive Cognate Dna-Eco Ri Complex at 2.50 A in the Presence of MN2+ Ion, PDB code: 1qps:

Manganese binding site 1 out of 1 in 1qps

Go back to Manganese Binding Sites List in 1qps
Manganese binding site 1 out of 1 in the The Crystal Structure of A Post-Reactive Cognate Dna-Eco Ri Complex at 2.50 A in the Presence of MN2+ Ion


Mono view


Stereo pair view

A full contact list of Manganese with other atoms in the Mn binding site number 1 of The Crystal Structure of A Post-Reactive Cognate Dna-Eco Ri Complex at 2.50 A in the Presence of MN2+ Ion within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mn278

b:44.4
occ:1.00
OP2 N:DA6 2.0 24.2 1.0
O N:HOH21 2.1 15.0 1.0
OD2 A:ASP91 2.2 29.4 1.0
OE1 A:GLU111 2.2 34.5 1.0
O N:HOH20 2.2 15.0 1.0
O A:ALA112 2.3 19.3 1.0
CG A:ASP91 3.1 26.5 1.0
P N:DA6 3.2 26.2 1.0
CD A:GLU111 3.4 29.2 1.0
OP3 N:DA6 3.4 26.9 0.5
OP3 N:DA6 3.5 26.9 0.5
C A:ALA112 3.5 19.0 1.0
CB A:ASP91 3.6 25.1 1.0
N A:ALA112 4.0 18.3 1.0
NZ A:LYS113 4.0 20.3 1.0
OD1 A:ASP91 4.0 28.4 1.0
CG A:GLU111 4.1 24.5 1.0
CA A:ALA112 4.2 17.8 1.0
OP1 N:DA6 4.3 26.9 1.0
O5' N:DA6 4.3 20.7 1.0
C5' N:DA6 4.4 23.7 1.0
OE2 A:GLU111 4.4 31.2 1.0
CD A:LYS113 4.5 19.5 1.0
N A:LYS113 4.6 17.6 1.0
CB A:ALA112 4.6 15.8 1.0
CE A:LYS113 4.7 20.2 1.0
CA A:LYS113 4.8 15.2 1.0
CA A:ASP91 5.0 20.5 1.0

Reference:

M.M.Horvath, J.Choi, Y.Kim, P.Wilkosz, J.M.Rosenberg. The Integration of Recognition and Cleavage: X-Ray Structures of Pre- Transition State and Post-Reactive Dna-Eco Ri Endonuclease Complexes To Be Published.
Page generated: Sat Oct 5 12:16:24 2024

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