Manganese in PDB 1on1: Bacillus Subtilis Manganese Transport Regulator (Mntr) Bound to Manganese, Ab Conformation.

The structure of Bacillus Subtilis Manganese Transport Regulator (Mntr) Bound to Manganese, Ab Conformation., PDB code: 1on1 was solved by A.Glasfeld, E.Guedon, J.D.Helmann, R.G.Brennan, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	40.50 / 1.75
Space group	P 1 21 1
Cell size a, b, c (Å), α, β, γ (°)	50.120, 46.020, 73.560, 90.00, 92.72, 90.00
R / Rfree (%)	21.6 / 24.6

The binding sites of Manganese atom in the Bacillus Subtilis Manganese Transport Regulator (Mntr) Bound to Manganese, Ab Conformation. (pdb code 1on1). This binding sites where shown within 5.0 Angstroms radius around Manganese atom.
In total 4 binding sites of Manganese where determined in the Bacillus Subtilis Manganese Transport Regulator (Mntr) Bound to Manganese, Ab Conformation., PDB code: 1on1:
Jump to Manganese binding site number: 1; 2; 3; 4;

Manganese binding site 1 out of 4 in the Bacillus Subtilis Manganese Transport Regulator (Mntr) Bound to Manganese, Ab Conformation.


Mono view


Stereo pair view

A full contact list of Manganese with other atoms in the Mn binding site number 1 of Bacillus Subtilis Manganese Transport Regulator (Mntr) Bound to Manganese, Ab Conformation. within 5.0Å range: probe atom residue distance (Å) B Occ A:Mn150 b:16.9 occ:1.00 OE2 A:GLU11 2.2 13.5 1.0 OE2 A:GLU99 2.2 17.5 1.0 ND1 A:HIS77 2.2 11.5 1.0 OE2 A:GLU102 2.3 15.9 1.0 O A:HOH153 2.4 26.1 1.0 O A:HOH154 2.4 26.8 1.0 OE1 A:GLU102 2.6 14.5 1.0 CD A:GLU102 2.7 14.5 1.0 CD A:GLU11 3.0 17.4 1.0 CE1 A:HIS77 3.1 9.5 1.0 OE1 A:GLU11 3.2 16.8 1.0 CG A:HIS77 3.2 13.5 1.0 CD A:GLU99 3.3 19.7 1.0 MN A:MN151 3.3 26.7 1.0 CB A:HIS77 3.6 11.4 1.0 OE1 A:GLU99 3.7 16.4 1.0 O A:HOH162 4.0 21.4 1.0 NE2 A:HIS77 4.2 12.3 1.0 CG A:GLU102 4.3 13.7 1.0 CD2 A:HIS77 4.3 10.5 1.0 CG A:GLU11 4.3 15.9 1.0 O A:HOH155 4.4 16.3 1.0 O A:HOH152 4.4 18.4 1.0 CG A:GLU99 4.5 15.8 1.0 O A:HOH203 4.6 25.3 1.0 O A:HOH189 4.6 24.9 1.0 CA A:GLU99 4.7 13.5 1.0 CA A:HIS77 4.7 13.2 1.0 CG1 A:VAL98 4.8 11.6 1.0 O A:HOH213 4.8 16.5 1.0

Manganese binding site 2 out of 4 in the Bacillus Subtilis Manganese Transport Regulator (Mntr) Bound to Manganese, Ab Conformation.


Mono view


Stereo pair view

A full contact list of Manganese with other atoms in the Mn binding site number 2 of Bacillus Subtilis Manganese Transport Regulator (Mntr) Bound to Manganese, Ab Conformation. within 5.0Å range: probe atom residue distance (Å) B Occ A:Mn151 b:26.7 occ:1.00 OE1 A:GLU11 2.1 16.8 1.0 OE2 A:GLU102 2.1 15.9 1.0 O A:HOH152 2.3 18.4 1.0 NE2 A:HIS103 2.3 17.3 1.0 OD2 A:ASP8 2.4 25.5 1.0 O A:HOH154 2.4 26.8 1.0 CD A:GLU102 3.1 14.5 1.0 CD A:GLU11 3.2 17.4 1.0 CE1 A:HIS103 3.2 21.4 1.0 CD2 A:HIS103 3.3 19.8 1.0 MN A:MN150 3.3 16.9 1.0 CG A:ASP8 3.4 27.1 1.0 OE2 A:GLU11 3.7 13.5 1.0 O A:HOH189 3.7 24.9 1.0 CG A:GLU102 3.9 13.7 1.0 OE1 A:GLU102 4.0 14.5 1.0 OE1 A:GLU99 4.1 16.4 1.0 OE2 A:GLU99 4.1 17.5 1.0 CB A:ASP8 4.1 26.2 1.0 CA A:ASP8 4.1 23.2 1.0 OD1 A:ASP8 4.2 30.0 1.0 CD A:GLU99 4.3 19.7 1.0 ND1 A:HIS103 4.3 20.8 1.0 CG A:GLU11 4.4 15.9 1.0 CG A:HIS103 4.4 18.4 1.0 O A:GLU99 4.6 13.7 1.0 CB A:GLU11 4.6 16.6 1.0 O A:HOH208 4.6 44.9 1.0 O A:HOH153 4.8 26.1 1.0 O A:HOH155 4.8 16.3 1.0 O A:ASP8 5.0 20.6 1.0

Manganese binding site 3 out of 4 in the Bacillus Subtilis Manganese Transport Regulator (Mntr) Bound to Manganese, Ab Conformation.


Mono view


Stereo pair view

A full contact list of Manganese with other atoms in the Mn binding site number 3 of Bacillus Subtilis Manganese Transport Regulator (Mntr) Bound to Manganese, Ab Conformation. within 5.0Å range: probe atom residue distance (Å) B Occ B:Mn150 b:15.9 occ:1.00 OE2 B:GLU11 2.2 13.4 1.0 ND1 B:HIS77 2.2 13.8 1.0 OE2 B:GLU99 2.2 17.5 1.0 OE2 B:GLU102 2.2 14.5 1.0 O B:HOH152 2.4 22.9 1.0 O B:HOH153 2.4 18.5 1.0 OE1 B:GLU102 2.6 13.9 1.0 CD B:GLU102 2.8 12.7 1.0 CD B:GLU11 3.0 16.6 1.0 CE1 B:HIS77 3.0 13.1 1.0 OE1 B:GLU11 3.2 13.3 1.0 CG B:HIS77 3.2 12.3 1.0 CD B:GLU99 3.3 18.0 1.0 MN B:MN151 3.4 18.4 1.0 CB B:HIS77 3.7 11.1 1.0 OE1 B:GLU99 3.8 16.3 1.0 O B:HOH161 4.0 16.4 1.0 NE2 B:HIS77 4.2 11.8 1.0 CG B:GLU102 4.3 12.3 1.0 CD2 B:HIS77 4.3 12.8 1.0 CG B:GLU11 4.3 14.8 1.0 CG B:GLU99 4.5 14.2 1.0 O B:HOH159 4.6 15.8 1.0 O B:HOH181 4.6 22.3 1.0 O B:HOH165 4.6 17.3 1.0 O B:HOH154 4.7 12.8 1.0 CA B:GLU99 4.7 12.0 1.0 CA B:HIS77 4.8 12.1 1.0 CG1 B:VAL98 4.8 9.2 1.0

Manganese binding site 4 out of 4 in the Bacillus Subtilis Manganese Transport Regulator (Mntr) Bound to Manganese, Ab Conformation.


Mono view


Stereo pair view

A full contact list of Manganese with other atoms in the Mn binding site number 4 of Bacillus Subtilis Manganese Transport Regulator (Mntr) Bound to Manganese, Ab Conformation. within 5.0Å range: probe atom residue distance (Å) B Occ B:Mn151 b:18.4 occ:1.00 OE1 B:GLU11 2.2 13.3 1.0 NE2 B:HIS103 2.2 15.2 1.0 OE2 B:GLU102 2.2 14.5 1.0 O B:HOH154 2.3 12.8 1.0 OD2 B:ASP8 2.3 20.4 1.0 O B:HOH152 2.5 22.9 1.0 CD B:GLU102 3.1 12.7 1.0 CE1 B:HIS103 3.1 17.6 1.0 CD2 B:HIS103 3.2 16.6 1.0 CD B:GLU11 3.3 16.6 1.0 CG B:ASP8 3.3 21.2 1.0 MN B:MN150 3.4 15.9 1.0 OE2 B:GLU11 3.7 13.4 1.0 O B:HOH165 3.8 17.3 1.0 CG B:GLU102 3.8 12.3 1.0 CB B:ASP8 3.9 19.4 1.0 OE1 B:GLU102 4.0 13.9 1.0 CA B:ASP8 4.0 18.6 1.0 OE2 B:GLU99 4.1 17.5 1.0 OE1 B:GLU99 4.2 16.3 1.0 ND1 B:HIS103 4.2 17.6 1.0 OD1 B:ASP8 4.3 23.0 1.0 CG B:HIS103 4.3 15.7 1.0 CD B:GLU99 4.4 18.0 1.0 CG B:GLU11 4.5 14.8 1.0 O B:HOH182 4.5 33.8 1.0 O B:GLU99 4.5 14.7 1.0 CB B:GLU11 4.7 16.0 1.0 O B:HOH153 4.8 18.5 1.0 O B:ASP8 4.8 15.7 1.0 O B:HOH159 4.9 15.8 1.0 N B:ASP8 4.9 17.6 1.0 C B:ASP8 5.0 18.1 1.0

A.Glasfeld, E.Guedon, J.D.Helmann, R.G.Brennan. Structure of the Manganese-Bound Manganese Transport Regulator of Bacillus Subtilis Nat.Struct.Biol. V. 10 652 2003.
ISSN: ISSN 1072-8368
PubMed: 12847518
DOI: 10.1038/NSB951