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Manganese in the structure of Dna Polymerase (E.C. Complex (pdb 1noy)

The binding sites of Manganese atom in the structure of Dna Polymerase (E.C. Complex (pdb code 1noy). This binding sites where shown with 5.0 Angstroms radius around Manganese atom.
The 1noy structure was solved by J.WANG, P.YU, T.C.LIN, W.H.KONIGSBERG, T.A.STEITZ, with X-Ray Crystallography technique, brief refinement statistics is given in the table below:
Resolution (A)6.0-2.2
Space groupP21212
a (A)114.701
b (A)109.656
c (A)70.268
alpha (°)90.00
beta (°)90.00
gamma (°)90.00
Rfactor (%)22.2
Rfree (%)n/a

Manganese Binding Sites:

Manganese binding site 1 out of 1 in 1noy

Manganese binding site 1 out of 1 in 1noy
Click to enlarge
stereopicture of Manganese binding site 1 out of 1 in 1noy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 1 of Manganese in the PDB 1noy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Manganese atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: S: Dt4, S: Dt5, B: Asp112, B: Ile113, B: Trp213, B: Asp219, B: Zn2000, S: Hoh108, B: Hoh3032,

conact list:

AtomAtomDistance (A)
MnC3' S:Dt43.92
MnO3' S:Dt42.99
MnO4' S:Dt44.90
MnC5' S:Dt44.66
MnC2' S:Dt44.56
MnC4' S:Dt43.82
MnOP1 S:Dt53.39
MnP S:Dt53.97
MnC5' S:Dt54.04
MnO5' S:Dt54.49
MnCB B:Asp1124.53
MnOD2 B:Asp1123.12
MnOD1 B:Asp1122.87
MnCG B:Asp1123.24
MnCA B:Asp1124.69
MnO B:Ile1134.10
MnN B:Ile1134.77
MnO B:Trp2134.70
MnOD2 B:Asp2193.87
MnOD1 B:Asp2193.94
MnCG B:Asp2194.35
MnZN B:Zn20004.59
MnO S:Hoh1082.06
MnO B:Hoh30321.33

interactive model:

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