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Manganese in PDB 1mvq: Cratylia Mollis Lectin (Isoform 1) in Complex with Methyl-Alpha-D- Mannose

Protein crystallography data

The structure of Cratylia Mollis Lectin (Isoform 1) in Complex with Methyl-Alpha-D- Mannose, PDB code: 1mvq was solved by G.A.De Souza, P.S.Oliveira, S.Trapani, M.T.Correia, G.Oliva, L.C.Coelho, L.J.Greene, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 9.94 / 1.77
Space group I 2 2 2
Cell size a, b, c (Å), α, β, γ (°) 63.449, 77.956, 105.323, 90.00, 90.00, 90.00
R / Rfree (%) 14 / 17

Other elements in 1mvq:

The structure of Cratylia Mollis Lectin (Isoform 1) in Complex with Methyl-Alpha-D- Mannose also contains other interesting chemical elements:

Calcium (Ca) 1 atom

Manganese Binding Sites:

The binding sites of Manganese atom in the Cratylia Mollis Lectin (Isoform 1) in Complex with Methyl-Alpha-D- Mannose (pdb code 1mvq). This binding sites where shown within 5.0 Angstroms radius around Manganese atom.
In total only one binding site of Manganese was determined in the Cratylia Mollis Lectin (Isoform 1) in Complex with Methyl-Alpha-D- Mannose, PDB code: 1mvq:

Manganese binding site 1 out of 1 in 1mvq

Go back to Manganese Binding Sites List in 1mvq
Manganese binding site 1 out of 1 in the Cratylia Mollis Lectin (Isoform 1) in Complex with Methyl-Alpha-D- Mannose


Mono view


Stereo pair view

A full contact list of Manganese with other atoms in the Mn binding site number 1 of Cratylia Mollis Lectin (Isoform 1) in Complex with Methyl-Alpha-D- Mannose within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mn239

b:13.9
occ:1.00
OE2 A:GLU8 2.1 13.9 1.0
O A:HOH240 2.1 19.0 1.0
OD2 A:ASP10 2.1 12.4 1.0
OD1 A:ASP19 2.1 14.9 1.0
NE2 A:HIS24 2.1 15.6 1.0
O A:HOH241 2.2 17.0 1.0
CE1 A:HIS24 3.0 16.3 1.0
CG A:ASP10 3.1 13.4 1.0
CD A:GLU8 3.1 15.3 1.0
CG A:ASP19 3.1 20.0 1.0
CD2 A:HIS24 3.1 17.0 1.0
OE1 A:GLU8 3.4 15.2 1.0
CB A:ASP10 3.5 13.1 1.0
OD2 A:ASP19 3.6 14.6 1.0
O A:HOH293 3.8 32.5 1.0
O A:HOH243 4.0 18.4 1.0
OD1 A:ASP10 4.1 15.5 1.0
ND1 A:HIS24 4.2 17.3 1.0
CA A:CA238 4.2 14.8 1.0
CG A:HIS24 4.3 16.8 1.0
OG A:SER34 4.3 16.7 1.0
CB A:ASP19 4.3 20.6 1.0
CG A:GLU8 4.4 14.1 1.0
O A:HOH301 4.5 42.4 1.0
CA A:ASP19 4.6 21.8 1.0
O A:ILE32 4.9 18.7 1.0

Reference:

G.A.De Souza, P.S.Oliveira, S.Trapani, A.C.Santos, J.C.Rosa, H.J.Laure, M.T.Correia, G.A.Tavares, G.Oliva, L.C.Coelho, L.J.Greene. Amino Acid Sequence and Tertiary Structure of Cratylia Mollis Seed Lectin Glycobiology V. 13 961 2003.
ISSN: ISSN 0959-6658
PubMed: 12966038
DOI: 10.1093/GLYCOB/CWG115
Page generated: Sat Oct 5 11:46:31 2024

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