Manganese in PDB 1msd: Comparison of the Crystal Structures of Genetically Engineered Human Manganese Superoxide Dismutase and Manganese Superoxide Dismutase From Thermus Thermophilus. Differences in Dimer-Dimer Interactions.

Enzymatic activity of Comparison of the Crystal Structures of Genetically Engineered Human Manganese Superoxide Dismutase and Manganese Superoxide Dismutase From Thermus Thermophilus. Differences in Dimer-Dimer Interactions.

All present enzymatic activity of Comparison of the Crystal Structures of Genetically Engineered Human Manganese Superoxide Dismutase and Manganese Superoxide Dismutase From Thermus Thermophilus. Differences in Dimer-Dimer Interactions.:
1.15.1.1;

Protein crystallography data

The structure of Comparison of the Crystal Structures of Genetically Engineered Human Manganese Superoxide Dismutase and Manganese Superoxide Dismutase From Thermus Thermophilus. Differences in Dimer-Dimer Interactions., PDB code: 1msd was solved by J.Sussman, U.G.Wagner, K.A.Pattridge, M.L.Ludwig, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

*Resolution Low / High (Å)*	N/A / 3.20
*Space group*	P 2₁ 2₁ 2
*Cell size a, b, c (Å), α, β, γ (°)*	77.800, 74.100, 68.420, 90.00, 90.00, 90.00
*R / R_free (%)*	n/a / n/a

Manganese Binding Sites:

The binding sites of Manganese atom in the Comparison of the Crystal Structures of Genetically Engineered Human Manganese Superoxide Dismutase and Manganese Superoxide Dismutase From Thermus Thermophilus. Differences in Dimer-Dimer Interactions. (pdb code 1msd). This binding sites where shown within 5.0 Angstroms radius around Manganese atom.
In total 2 binding sites of Manganese where determined in the Comparison of the Crystal Structures of Genetically Engineered Human Manganese Superoxide Dismutase and Manganese Superoxide Dismutase From Thermus Thermophilus. Differences in Dimer-Dimer Interactions., PDB code: 1msd:
Jump to Manganese binding site number: 1; 2;

Manganese binding site 1 out of 2 in 1msd

Go back to

Manganese Binding Sites List in 1msd

Manganese binding site 1 out of 2 in the Comparison of the Crystal Structures of Genetically Engineered Human Manganese Superoxide Dismutase and Manganese Superoxide Dismutase From Thermus Thermophilus. Differences in Dimer-Dimer Interactions.

Mono view

Stereo pair view

A full contact list of Manganese with other atoms in the Mn binding site number 1 of Comparison of the Crystal Structures of Genetically Engineered Human Manganese Superoxide Dismutase and Manganese Superoxide Dismutase From Thermus Thermophilus. Differences in Dimer-Dimer Interactions. within 5.0Å range:

probe	atom	residue	distance (Å)	B	Occ
A:Mn200 b:10.0 occ:1.00	NE2	A:HIS163	1.9	3.0	1.0
	NE2	A:HIS74	1.9	2.0	1.0
	OD2	A:ASP159	2.1	2.0	1.0
	NE2	A:HIS26	2.3	11.6	1.0
	CE1	A:HIS163	2.4	3.0	1.0
	CE1	A:HIS74	2.6	2.0	1.0
	CD2	A:HIS163	3.0	3.0	1.0
	CD2	A:HIS74	3.1	2.0	1.0
	CG	A:ASP159	3.1	2.0	1.0
	CD2	A:HIS26	3.2	11.6	1.0
	CE1	A:HIS26	3.3	11.6	1.0
	OD1	A:ASP159	3.4	2.0	1.0
	ND1	A:HIS163	3.5	3.0	1.0
	ND1	A:HIS74	3.7	2.0	1.0
	HE21	A:GLN143	3.8	10.0	1.0
	CG	A:HIS163	3.9	3.0	1.0
	CG	A:HIS74	4.0	2.0	1.0
	NE2	A:GLN143	4.1	2.7	1.0
	OE1	A:GLN143	4.3	2.7	1.0
	CZ2	A:TRP123	4.4	2.0	1.0
	CG	A:HIS26	4.4	11.6	1.0
	CB	A:ASP159	4.4	2.0	1.0
	ND1	A:HIS26	4.4	11.6	1.0
	HE22	A:GLN143	4.5	10.0	1.0
	CB	A:TRP161	4.6	20.9	1.0
	CG	A:TRP161	4.7	20.9	1.0
	CD	A:GLN143	4.8	2.7	1.0
	OH	A:TYR34	4.8	2.0	1.0
	CH2	A:TRP123	4.9	2.0	1.0

Manganese binding site 2 out of 2 in 1msd

Go back to

Manganese Binding Sites List in 1msd

Manganese binding site 2 out of 2 in the Comparison of the Crystal Structures of Genetically Engineered Human Manganese Superoxide Dismutase and Manganese Superoxide Dismutase From Thermus Thermophilus. Differences in Dimer-Dimer Interactions.

Mono view

Stereo pair view

A full contact list of Manganese with other atoms in the Mn binding site number 2 of Comparison of the Crystal Structures of Genetically Engineered Human Manganese Superoxide Dismutase and Manganese Superoxide Dismutase From Thermus Thermophilus. Differences in Dimer-Dimer Interactions. within 5.0Å range:

probe	atom	residue	distance (Å)	B	Occ
B:Mn200 b:10.0 occ:1.00	NE2	B:HIS163	1.8	2.0	1.0
	OD2	B:ASP159	1.9	15.5	1.0
	NE2	B:HIS74	2.1	2.5	1.0
	NE2	B:HIS26	2.3	8.1	1.0
	CE1	B:HIS163	2.3	2.0	1.0
	CE1	B:HIS74	2.7	2.5	1.0
	CG	B:ASP159	2.9	15.5	1.0
	CD2	B:HIS163	3.0	2.0	1.0
	OD1	B:ASP159	3.2	15.5	1.0
	CD2	B:HIS74	3.2	2.5	1.0
	CE1	B:HIS26	3.2	8.1	1.0
	CD2	B:HIS26	3.3	8.1	1.0
	ND1	B:HIS163	3.5	2.0	1.0
	HE21	B:GLN143	3.8	10.0	1.0
	CG	B:HIS163	3.8	2.0	1.0
	ND1	B:HIS74	3.9	2.5	1.0
	NE2	B:GLN143	4.1	9.8	1.0
	CG	B:HIS74	4.1	2.5	1.0
	CB	B:ASP159	4.3	15.5	1.0
	OE1	B:GLN143	4.4	9.8	1.0
	ND1	B:HIS26	4.4	8.1	1.0
	CZ2	B:TRP123	4.4	3.8	1.0
	CB	B:TRP161	4.4	2.0	1.0
	CG	B:HIS26	4.4	8.1	1.0
	HE22	B:GLN143	4.5	10.0	1.0
	CG	B:TRP161	4.6	2.0	1.0
	CD	B:GLN143	4.8	9.8	1.0
	CH2	B:TRP123	4.9	3.8	1.0
	CD1	B:TRP161	4.9	2.0	1.0
	OH	B:TYR34	4.9	19.3	1.0

Reference:

U.G.Wagner, K.A.Pattridge, M.L.Ludwig, W.C.Stallings, M.M.Werber, C.Oefner, F.Frolow, J.L.Sussman. Comparison of the Crystal Structures of Genetically Engineered Human Manganese Superoxide Dismutase and Manganese Superoxide Dismutase From Thermus Thermophilus: Differences in Dimer-Dimer Interaction. Protein Sci. V. 2 814 1993.
ISSN: ISSN 0961-8368
PubMed: 8495200

Page generated: Sat Oct 5 11:44:48 2024

Last articles

Zn in 9JPJ
Zn in 9JP7
Zn in 9JPK
Zn in 9JPL
Zn in 9GN6
Zn in 9GN7
Zn in 9GKU
Zn in 9GKW
Zn in 9GKX
Zn in 9GL0

	© Copyright 2008-2020 by atomistry.com
Home \| Site Map \| Copyright \| Contact us \| Privacy