Manganese in the structure of Crystal Structure of Rabbit Muscle Glycogenin Complexed With Udp- Glucose and Manganese (pdb 1ll2)

The binding sites of Manganese atom in the structure of Crystal Structure of Rabbit Muscle Glycogenin Complexed With Udp- Glucose and Manganese (pdb code 1ll2). This binding sites where shown with 5.0 Angstroms radius around Manganese atom. The 1ll2 structure was solved by B.J.GIBBONS, P.J.ROACH, T.D.HURLEY, with X-Ray Crystallography technique, brief refinement statistics is given in the table below: Resolution (A) 30.0-1.9 Space group I222 a (A) 57.887 b (A) 106.875 c (A) 122.253 alpha (°) 90.00 beta (°) 90.00 gamma (°) 90.00 Rfactor (%) 19.4 Rfree (%) 22.7 Manganese Binding Sites: Manganese binding site 1 out of 1 in 1ll2 Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 1 of Manganese in the PDB 1ll2. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Manganese atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: A: Asp102, A: Asp104, A: His212, A: Leu214, A: Lys218, A: Upg334, conact list: Atom Atom Distance (A) Mn CB A:Asp102 3.47 Mn OD2 A:Asp102 2.08 Mn OD1 A:Asp102 4.22 Mn CG A:Asp102 3.10 Mn CA A:Asp102 4.93 Mn N A:Asp104 4.91 Mn CB A:Asp104 4.21 Mn OD2 A:Asp104 2.59 Mn OD1 A:Asp104 2.23 Mn CG A:Asp104 2.73 Mn CA A:Asp104 4.97 Mn NE2 A:His212 2.23 Mn ND1 A:His212 4.32 Mn CD2 A:His212 3.22 Mn CE1 A:His212 3.20 Mn CG A:His212 4.37 Mn CA A:Leu214 4.73 Mn NZ A:Lys218 4.42 Mn O3B A:Upg334 4.55 Mn PA A:Upg334 3.46 Mn O3C A:Upg334 3.79 Mn C4C A:Upg334 4.69 Mn C5C A:Upg334 4.11 Mn O5' A:Upg334 4.78 Mn O2B A:Upg334 4.00 Mn O3A A:Upg334 3.59 Mn O5C A:Upg334 4.17 Mn O2A A:Upg334 4.71 Mn O1B A:Upg334 2.11 Mn C3C A:Upg334 4.54 Mn O6' A:Upg334 4.81 Mn PB A:Upg334 3.43 Mn C5' A:Upg334 4.84 Mn C6' A:Upg334 4.79 Mn O1A A:Upg334 2.32 interactive model: