Manganese in the structure of Interaction Of A Legume Lectin With The N2 Fragment Of Human Lactotransferrin Or With The Isolated Biantennary Glycopeptide: Role of the Fucose Moiety (pdb 1lgb)

The binding sites of Manganese atom in the structure of Interaction Of A Legume Lectin With The N2 Fragment Of Human Lactotransferrin Or With The Isolated Biantennary Glycopeptide: Role of the Fucose Moiety (pdb code 1lgb). This binding sites where shown with 5.0 Angstroms radius around Manganese atom. The 1lgb structure was solved by Y.BOURNE, C.CAMBILLAU, with X-Ray Crystallography technique, brief refinement statistics is given in the table below: Resolution (A) 6.0-3.3 Space group P43212 a (A) 63.500 b (A) 63.500 c (A) 251.900 alpha (°) 90.00 beta (°) 90.00 gamma (°) 90.00 Rfactor (%) 21 Rfree (%) n/a Manganese Binding Sites: Manganese binding site 1 out of 1 in 1lgb Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 1 of Manganese in the PDB 1lgb. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Manganese atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: A: Glu119, A: Asp121, A: Trp128, A: Asp129, A: His136, A: Ile144, A: Ser146, A: Thr149, A: Ca301, conact list: Atom Atom Distance (A) Mn OE1 A:Glu119 3.28 Mn OE2 A:Glu119 2.34 Mn CD A:Glu119 3.09 Mn CG A:Glu119 4.42 Mn CB A:Asp121 3.88 Mn OD2 A:Asp121 3.99 Mn OD1 A:Asp121 4.76 Mn CG A:Asp121 4.05 Mn CD1 A:Trp128 4.86 Mn OD2 A:Asp129 4.36 Mn OD1 A:Asp129 2.76 Mn CG A:Asp129 3.90 Mn NE2 A:His136 3.33 Mn CD2 A:His136 4.26 Mn CE1 A:His136 3.95 Mn O A:Ile144 4.03 Mn OG A:Ser146 4.76 Mn CG2 A:Thr149 4.99 Mn CA A:Ca301 4.61 interactive model: