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Manganese in PDB 1lem: The Monosaccharide Binding Site of Lentil Lectin: An X-Ray and Molecular Modelling Study

Protein crystallography data

The structure of The Monosaccharide Binding Site of Lentil Lectin: An X-Ray and Molecular Modelling Study, PDB code: 1lem was solved by R.Loris, L.Wyns, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) N/A / 3.00
Space group P 65 2 2
Cell size a, b, c (Å), α, β, γ (°) 85.710, 85.710, 165.380, 90.00, 90.00, 120.00
R / Rfree (%) 20.6 / n/a

Other elements in 1lem:

The structure of The Monosaccharide Binding Site of Lentil Lectin: An X-Ray and Molecular Modelling Study also contains other interesting chemical elements:

Calcium (Ca) 1 atom

Manganese Binding Sites:

The binding sites of Manganese atom in the The Monosaccharide Binding Site of Lentil Lectin: An X-Ray and Molecular Modelling Study (pdb code 1lem). This binding sites where shown within 5.0 Angstroms radius around Manganese atom.
In total only one binding site of Manganese was determined in the The Monosaccharide Binding Site of Lentil Lectin: An X-Ray and Molecular Modelling Study, PDB code: 1lem:

Manganese binding site 1 out of 1 in 1lem

Go back to Manganese Binding Sites List in 1lem
Manganese binding site 1 out of 1 in the The Monosaccharide Binding Site of Lentil Lectin: An X-Ray and Molecular Modelling Study


Mono view


Stereo pair view

A full contact list of Manganese with other atoms in the Mn binding site number 1 of The Monosaccharide Binding Site of Lentil Lectin: An X-Ray and Molecular Modelling Study within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mn250

b:42.7
occ:1.00
OD1 A:ASP129 2.1 57.5 1.0
NE2 A:HIS136 2.5 48.3 1.0
OD2 A:ASP121 2.5 31.8 1.0
OE2 A:GLU119 2.8 45.1 1.0
O A:HOH270 3.0 40.5 1.0
CG A:ASP129 3.2 52.8 1.0
CE1 A:HIS136 3.3 47.2 1.0
CG A:ASP121 3.5 34.7 1.0
CD2 A:HIS136 3.5 49.7 1.0
CD A:GLU119 3.5 38.3 1.0
OE1 A:GLU119 3.6 35.2 1.0
CB A:ASP121 3.7 32.3 1.0
OD2 A:ASP129 3.8 51.2 1.0
OG A:SER146 4.1 42.2 1.0
CA A:CA249 4.3 35.0 1.0
CB A:ASP129 4.3 52.2 1.0
ND1 A:HIS136 4.5 46.0 1.0
CD1 A:TRP128 4.5 49.8 1.0
OD1 A:ASP121 4.6 33.9 1.0
O A:ILE144 4.6 36.7 1.0
CG A:HIS136 4.6 48.0 1.0
CA A:ASP129 4.6 51.9 1.0
NE1 A:TRP128 4.6 50.2 1.0
CD A:PRO130 4.9 56.2 1.0
CG A:GLU119 4.9 35.7 1.0

Reference:

R.Loris, F.Casset, J.Bouckaert, J.Pletinckx, M.H.Dao-Thi, F.Poortmans, A.Imberty, S.Perez, L.Wyns. The Monosaccharide Binding Site of Lentil Lectin: An X-Ray and Molecular Modelling Study. Glycoconj.J. V. 11 507 1994.
PubMed: 7696853
DOI: 10.1007/BF00731301
Page generated: Tue Dec 15 03:51:55 2020

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