Chemical elements
  Manganese
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    PDB 117e-1cs0
    PDB 1cvn-1fbg
    PDB 1fe1-1gz9
    PDB 1gzc-1j53
    PDB 1j54-1kx3
      1j54
      1j58
      1ja8
      1jai
      1jaw
      1jbc
      1jdb
      1jfz
      1jg7
      1jjc
      1jk7
      1jku
      1jkv
      1jlk
      1jlm
      1jm0
      1jmb
      1jn2
      1joj
      1jpr
      1jqc
      1jqn
      1jr9
      1jst
      1jui
      1jw6
      1jxn
      1jyc
      1jyi
      1k20
      1k23
      1k4l
      1k4o
      1k4v
      1k83
      1kee
      1kfl
      1kgp
      1kgz
      1khb
      1khe
      1khf
      1khg
      1khw
      1kkc
      1knj
      1knk
      1ksi
      1kws
      1kx3
    PDB 1kx4-1mav
    PDB 1mb0-1nvm
    PDB 1nxd-1pj2
    PDB 1pj3-1r8b
    PDB 1r8c-1tc2
    PDB 1tei-1vby
    PDB 1vew-1xid
    PDB 1xie-1za0
    PDB 1zao-2ah9
    PDB 2akw-2brl
    PDB 2bvl-2dvb
    PDB 2dvd-2g38
    PDB 2g4i-2ify
    PDB 2iie-2mnr
    PDB 2muc-2p9a
    PDB 2pal-2r21
    PDB 2r22-2vqr
    PDB 2vs3-2z87
    PDB 2zad-3bso
    PDB 3bu0-3e7b
    PDB 3e8q-3g82
    PDB 3gbc-3ilm
    PDB 3ioi-3lp0
    PDB 3lp1-3n25
    PDB 3n37-3pvb
    PDB 3py5-3tmy
    PDB 3twz-4e5f
    PDB 4e5g-8icv
    PDB 8icw-9xim

Manganese in the structure of Phosphorylated Cyclin-Dependent Kinase-2 Bound to Cyclin A (pdb 1jst)






The binding sites of Manganese atom in the structure of Phosphorylated Cyclin-Dependent Kinase-2 Bound to Cyclin A (pdb code 1jst). This binding sites where shown with 5.0 Angstroms radius around Manganese atom.
The 1jst structure was solved by A.A.RUSSO, P.D.JEFFREY, N.P.PAVLETICH, with X-Ray Crystallography technique, brief refinement statistics is given in the table below:
Resolution (A)7.0-2.6
Space groupP212121
a (A)139.600
b (A)149.100
c (A)74.200
alpha (°)90.00
beta (°)90.00
gamma (°)90.00
Rfactor (%)n/a
Rfree (%)n/a


Manganese Binding Sites:

Manganese binding site 1 out of 2 in 1jst


Manganese binding site 1 out of 2 in 1jst
Click to enlarge
stereopicture of Manganese binding site 1 out of 2 in 1jst
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 1 of Manganese in the PDB 1jst. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Manganese atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Gln131, A: Asn132, A: Asp145, A: Atp300,

conact list:


AtomAtomDistance (A)
MnO A:Gln1314.89
MnC A:Gln1314.97
MnN A:Asn1324.84
MnCB A:Asn1324.62
MnND2 A:Asn1324.22
MnOD1 A:Asn1322.28
MnCG A:Asn1323.51
MnCA A:Asn1324.65
MnCB A:Asp1453.70
MnOD2 A:Asp1452.88
MnOD1 A:Asp1454.78
MnCG A:Asp1453.64
MnPA A:Atp3003.72
MnO3' A:Atp3004.96
MnO5' A:Atp3003.42
MnO3A A:Atp3004.71
MnC3' A:Atp3004.93
MnO2A A:Atp3002.48
MnO1B A:Atp3004.28
MnC5' A:Atp3004.18
MnO1G A:Atp3004.16
MnO1A A:Atp3004.80

interactive model:


Manganese binding site 2 out of 2 in 1jst


Manganese binding site 2 out of 2 in 1jst
Click to enlarge
stereopicture of Manganese binding site 2 out of 2 in 1jst
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 2 of Manganese in the PDB 1jst. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Manganese atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: C: Gln131, C: Asn132, C: Asp145, C: Atp300,

conact list:


AtomAtomDistance (A)
MnO C:Gln1314.54
MnNE2 C:Gln1314.98
MnC C:Gln1314.79
MnCG C:Gln1314.58
MnN C:Asn1324.86
MnCB C:Asn1324.62
MnND2 C:Asn1324.20
MnOD1 C:Asn1322.23
MnCG C:Asn1323.48
MnCA C:Asn1324.65
MnCB C:Asp1454.31
MnOD2 C:Asp1453.05
MnOD1 C:Asp1454.86
MnCG C:Asp1453.92
MnPG C:Atp3003.98
MnO3B C:Atp3004.73
MnO2G C:Atp3002.43
MnPA C:Atp3003.67
MnO3' C:Atp3004.11
MnC4' C:Atp3004.16
MnO5' C:Atp3002.52
MnO3A C:Atp3003.58
MnC3' C:Atp3004.44
MnO3G C:Atp3004.93
MnO2A C:Atp3004.05
MnO1B C:Atp3004.16
MnPB C:Atp3004.57
MnC5' C:Atp3002.86
MnO1G C:Atp3004.63
MnO1A C:Atp3004.85

interactive model:




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